SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene9166

Length: 594 nt

Origin of reads: Uagpf

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene9166

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	glycoside hydrolase family 47 protein; K10085 ER degradation enhancer, mannosidase alpha-like 2	-	-	6.0e-22	64%
FL-Next	sp=Probable alpha-mannosidase I MNS4; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	79%
Blast2go	glycoside hydrolase family 47 protein	-	-	6.67506e-23	88%

Source	GOs	Term	Type	e value	Identity
Blast2go	hydrolase activity, acting on glycosyl bonds	GO:0016798	Molecular Function	6.67506e-23	88%
Blast2go	cell part	GO:0044464	Cellular Component	6.67506e-23	88%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Glycoside hydrolase, family 47	IPR001382	-	6.67506e-23	88%

Full-Lengther Next Prediction

SNPs (tot: 18)

Position	A %	C %	G %	T %	Probability
100			50	50	1.0
101	50			50	1.0
102	50	50			1.0
103			50	50	1.0
106	50			50	1.0
107		50		50	1.0
109	50			50	1.0
110	50			50	1.0
111	50		50		1.0
113		50	50		1.0
116		16		83	0.994512
117	16	33		50	1.0
118	33		16	50	1.0
119		33	66		1.0
122	33			66	1.0
126	83		16		0.994512
429		75		25	0.996473
430		33		66	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain