SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene8721

Length: 819 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene8721

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	50S ribosomal protein L18, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9RCM8_RICCO	-	-	80%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	80%
Blast2go	50s ribosomal protein l18	-	-	87%

Source	GOs	Term	Type	e value	Identity
Blast2go	chloroplast envelope	GO:0009941	Cellular Component	0.0	87%

Full-Lengther Next Prediction

SNPs (tot: 19)

Position	A %	C %	G %	T %	Probability
410	16			83	0.994512
412		83	16		0.994512
413		83	16		0.994512
419	85	14			0.993533
420	85		14		0.993533
421		85		14	0.993533
422	85	14			0.993533
423	85		14		0.993533
424	85			14	0.993533
425		85	14		0.993533
431			14	85	0.993533
432	85		14		0.993533
433		14		85	0.993533
436		85		14	0.993533
439	85			14	0.993533
440		14	85		0.993533
441	14			85	0.993533
515		73		26	1.0
631		37		62	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain