SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene8708

Length: 976 nt

Origin of reads: Biogeco_1 Uagpf

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v1.1_unigene8708 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Salt overly sensitive 1 n=2 Tax=Vitis vinifera RepID=D0V1M4_VITVI	-	-	3.0e-17	33%
FL-Next	sp=Sodium/hydrogen exchanger 7; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	36%
Blast2go	salt overly sensitive 1	-	-	5.12539e-17	52%

Full-Lengther Next Prediction

SNPs (tot: 50)

Position	A %	C %	G %	T %	Probability
345		90		10	0.90298
376	20		80		0.999996
388		90		10	0.90298
400		80		20	0.999996
452	11			88	0.923564
457			88	11	0.923564
461		11	88		0.923564
462	11			88	0.923564
468	11	88			0.923564
472			88	11	0.923564
473	88	11			0.923564
475	88	11			0.923564
478		11		88	0.923564
479	88		11		0.923564
481	12			87	0.992554
482			12	87	0.992554
484	25	75			1.0
485		75	25		1.0
487	75		25		1.0
489		25		62	1.0
491			12	62	1.0
493		25		75	1.0
494		37	62		1.0
496	25			62	1.0
497		75	25		1.0
499	75			25	1.0
501	12	12	75		0.975346
502	14	85			0.993533
503		14		71	0.984337
506		28		71	1.0
511	80		20		0.995493
537	25	75			0.996473
539		25		75	0.996473
570		16		83	0.994512
579		16		83	0.994512
599		83		16	0.994512
600	83		16		0.994512
601	16	83			0.994512
605		83	16		0.994512
609	16			83	0.994512
611		16	83		0.994512
612	83	16			0.994512
613	16			83	0.994512
614	16			83	0.994512
616		83	16		0.994512
619	20			80	0.995493
620		20		80	0.995493
622	20	80			0.995493
623	80	20			0.995493
638		66	33		0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain