SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene8331

Length: 2117 nt

Origin of reads: Biogeco_1 Uagpf Uma

UniGene Fasta

>sp_v1.1_unigene8331
CGTCGTGACCTTGGCTGTCACTCATTTTAATACTTAACCGGCACACACAGAAGCCAACCAACCCAGAAACTGGCAGGGGTTCTGCTGCTACTTTGCAATGGCGATGACAAAAGTTGGGCGGGGATTCCAGTCCCGGATCGATAAACTGAACACTTTTGTGGGCAAGAGCGCGGTGGGTCGATACTTCAAGCTGGACGCCCGGAATTCGTGCTTCACAAGAGAGATCCGGGCGGGAACGGCAACGTTTCTGACAATGGCTTACATTCTAGCCGTCAACGCCAGCATTCTCACTGACTCGGGCGGCCCCTGCACGGTGGCTGACTGCACATCCACCTGCAGCGACTCGTCCGTTGCCGCGAGCTTGTGCCATGGGCGCAGCGCTAACGGGACGGTGTTGAGCTTGGTGAGCCCCGGGGTCGAGTGCAAGTTTCCGCCGGTGAACCCTGGTTACACGGCGTGCCTGGACAGAACGAAGAAGGACCTGATTGTGGCCACGGTGGCGTCGTCGCTCATCGGGTGTTTTATCATGGGGGTGTTTGCGAATTTGCCCTTGGCACTGGCGCCCGGCATGGGGACAAACGCGTATTTTGCTTATACAGTTGTGGGTTACCATGGCTCCGGGTCAATCTCGTATAAAAGCGCCCTGGCGGCTGTTTTTATCGAGGGGATTTTGTTTCTGCTCATTGCGGCTCTCGGTTTCAGGACGAAGCTCGCCAAGATGGTGCCGAAGCCGGTTCGAATCTCCTCGTCCGCAGGGATCGGTCTGTTTCTCGCCTTCATCGGGCTGCAATCCAGCGAGGGCATCGGGCTCGTCCAGTACAGCTCGTCGACTCTGGTAACGCTGGGCGCTTGCCCAAAAAAATACATGGTCGGGCTAGCGCCCGTGCAGACGTTTCTCAACGGGACAACGGAGCTTCTCGCTGGAGGCACCGTCTCAGGCGACATTTTTTGCCTCAAGGGACGAATGGAGAGCCCCACTTTCTGGCTCGGAATCGTCGGCTTCGTTATCATCGCTTACTGCCTGGTGCACAACGTGAAGGGCGCTATGATCTACGGAATCGTGTTCGTGACCGCCATCTCATGGTTCCGCCACACTCAGGTCACTTACTTCGACGACACCATTACAGGGAACGAGTCCTATGATTATTTCAAAAAAGTCGTAGATGTGCACAAGATTACCGGCACGGCCGGGGCCCTGAGCTTCAAGAATTTCCACAGCGGGCAGCTCTGGGTTGCTCTCATCACGTTTCTCTATGTAGATCTGCTGGACACCACCGGGACGCTTTACTCCATGGCCAAATTCGCAGGTTTCGTGGATGAAAAGGGGGATTTCGAAGGTCAATACTTTGCCTTCATGAGCGACGCCTTTGCCATCGTTATCGGTTCTCTGCTCGGCACTTCGCCCGTTACCACGTTCATAGAGTCCTCCACAGGAATCCGCGAAGGAGGCCGCACAGGACTCACCGCTCTAACGGTCTCCTGCTATTTCTTTCTCGCCTTCTTCTTCACGCCGCTTTTGGCCTCCATCCCGCCGTGGGCCGTCGGCCCGCCGCTCATTCTAGTCGGCGTGCTGATGATGAAGTCCGTGTTGGAAATCGACTGGGAGAACATGCGGGAAGCCATTCCAGCCTTCGTGACTCTCATTGTCATGCCCACCACCTACTCGATCGCCTATGGTTTGATCGGCGGAATCGGGACCTTCATCGTTCTACATCTCTGGGATTGGGTCAAGGACGCCTTCGGAAGCGTCGCCGGTAAGCGGAGGATCCAGTCCCCCACAGCCGCAGCCGCAGCCAACGGCCCCACGCAGAGAGACATTGAGATGAACGGATCTAGCATCTGACTTCGGCGGGCGGGGATCGAAGCCGTGACCTACAAAAAAAAACCACTCACAGGTTGTTATTCTATTGTTGTTTATTGTTAACAGGTAGCTTAGAAATCAGAGTAGGGCTTCGCAGCAGGCTGACTCCACCATGGCGTGTATATTATTTATTTTCAATGAAATTTACCCGATTCTTGACTTGNNNANTGTACAATGAACTGCATCTCGTCATGCCATGAAAAATTCAAACTTCTCTTTTTTCAATTAAAAAAAATTGCATGATTCGCTGAAAAAA

Ace file of the UniGene sp_v1.1_unigene8331

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Adenine/guanine permease AZG1 n=2 Tax=Arabidopsis RepID=AZG1_ARATH	-	-	73%
FL-Next	sp=Adenine/guanine permease AZG1; Arabidopsis thaliana (Mouse-ear cress).	-	-	75%
Blast2go	xanthine uracil permease family protein	-	-	81%

Source	GOs	Term	Type	Identity
Blast2go	guanine transport	GO:0015854	Biological Process	81%
Blast2go	adenine transport	GO:0015853	Biological Process	81%
Blast2go	purine base transmembrane transporter activity	GO:0005345	Molecular Function	81%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Xanthine/uracil/vitamin C permease	IPR006043	-	0.0	81%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: sp_plants

Fln subject: Q9SRK7

Fln msg:

Fln protein: MAMTKVGRGFQSRIDKLNTFVGKSAVGRYFKLDARNSCFTREIRAGTATFLTMAYILAVNASILTDSGGPCTVADCTSTCSDSSVAASLCHGRSANGTVLSLVSPGVECKFPPVNPGYTACLDRTKKDLIVATVASSLIGCFIMGVFANLPLALAPGMGTNAYFAYTVVGYHGSGSISYKSALAAVFIEGILFLLIAALGFRTKLAKMVPKPVRISSSAGIGLFLAFIGLQSSEGIGLVQYSSSTLVTLGACPKKYMVGLAPVQTFLNGTTELLAGGTVSGDIFCLKGRMESPTFWLGIVGFVIIAYCLVHNVKGAMIYGIVFVTAISWFRHTQVTYFDDTITGNESYDYFKKVVDVHKITGTAGALSFKNFHSGQLWVALITFLYVDLLDTTGTLYSMAKFAGFVDEKGDFEGQYFAFMSDAFAIVIGSLLGTSPVTTFIESSTGIREGGRTGLTALTVSCYFFLAFFFTPLLASIPPWAVGPPLILVGVLMMKSVLEIDWENMREAIPAFVTLIVMPTTYSIAYGLIGGIGTFIVLHLWDWVKDAFGSVAGKRRIQSPTAAAAANGPTQRDIEMNGSSI*

Protein Length: 583

Fln nts: CGTCGTGACCTTGGCTGTCACTCATTTTAATACTTAACCGGCACACACAGAAGCCAACCAACCCAGAAACTGGCAGGGGTTCTGCTGCTACTTTGCA_-_ATGGCGATGACAAAAGTTGGGCGGGGATTCCAGTCCCGGATCGATAAACTGAACACTTTTGTGGGCAAGAGCGCGGTGGGTCGATACTTCAAGCTGGACGCCCGGAATTCGTGCTTCACAAGAGAGATCCGGGCGGGAACGGCAACGTTTCTGACAATGGCTTACATTCTAGCCGTCAACGCCAGCATTCTCACTGACTCGGGCGGCCCCTGCACGGTGGCTGACTGCACATCCACCTGCAGCGACTCGTCCGTTGCCGCGAGCTTGTGCCATGGGCGCAGCGCTAACGGGACGGTGTTGAGCTTGGTGAGCCCCGGGGTCGAGTGCAAGTTTCCGCCGGTGAACCCTGGTTACACGGCGTGCCTGGACAGAACGAAGAAGGACCTGATTGTGGCCACGGTGGCGTCGTCGCTCATCGGGTGTTTTATCATGGGGGTGTTTGCGAATTTGCCCTTGGCACTGGCGCCCGGCATGGGGACAAACGCGTATTTTGCTTATACAGTTGTGGGTTACCATGGCTCCGGGTCAATCTCGTATAAAAGCGCCCTGGCGGCTGTTTTTATCGAGGGGATTTTGTTTCTGCTCATTGCGGCTCTCGGTTTCAGGACGAAGCTCGCCAAGATGGTGCCGAAGCCGGTTCGAATCTCCTCGTCCGCAGGGATCGGTCTGTTTCTCGCCTTCATCGGGCTGCAATCCAGCGAGGGCATCGGGCTCGTCCAGTACAGCTCGTCGACTCTGGTAACGCTGGGCGCTTGCCCAAAAAAATACATGGTCGGGCTAGCGCCCGTGCAGACGTTTCTCAACGGGACAACGGAGCTTCTCGCTGGAGGCACCGTCTCAGGCGACATTTTTTGCCTCAAGGGACGAATGGAGAGCCCCACTTTCTGGCTCGGAATCGTCGGCTTCGTTATCATCGCTTACTGCCTGGTGCACAACGTGAAGGGCGCTATGATCTACGGAATCGTGTTCGTGACCGCCATCTCATGGTTCCGCCACACTCAGGTCACTTACTTCGACGACACCATTACAGGGAACGAGTCCTATGATTATTTCAAAAAAGTCGTAGATGTGCACAAGATTACCGGCACGGCCGGGGCCCTGAGCTTCAAGAATTTCCACAGCGGGCAGCTCTGGGTTGCTCTCATCACGTTTCTCTATGTAGATCTGCTGGACACCACCGGGACGCTTTACTCCATGGCCAAATTCGCAGGTTTCGTGGATGAAAAGGGGGATTTCGAAGGTCAATACTTTGCCTTCATGAGCGACGCCTTTGCCATCGTTATCGGTTCTCTGCTCGGCACTTCGCCCGTTACCACGTTCATAGAGTCCTCCACAGGAATCCGCGAAGGAGGCCGCACAGGACTCACCGCTCTAACGGTCTCCTGCTATTTCTTTCTCGCCTTCTTCTTCACGCCGCTTTTGGCCTCCATCCCGCCGTGGGCCGTCGGCCCGCCGCTCATTCTAGTCGGCGTGCTGATGATGAAGTCCGTGTTGGAAATCGACTGGGAGAACATGCGGGAAGCCATTCCAGCCTTCGTGACTCTCATTGTCATGCCCACCACCTACTCGATCGCCTATGGTTTGATCGGCGGAATCGGGACCTTCATCGTTCTACATCTCTGGGATTGGGTCAAGGACGCCTTCGGAAGCGTCGCCGGTAAGCGGAGGATCCAGTCCCCCACAGCCGCAGCCGCAGCCAACGGCCCCACGCAGAGAGACATTGAGATGAACGGATCTAGCATCTGA___CTTCGGCGGGCGGGGATCGAAGCCGTGACCTACAAAAAAAAACCACTCACAGGTTGTTATTCTATTGTTGTTTATTGTTAACAGGTAGCTTAGAAATCAGAGTAGGGCTTCGCAGCAGGCTGACTCCACCATGGCGTGTATATTATTTATTTTCAATGAAATTTACCCGATTCTTGACTTGactAgTGTACAATGAACTGCATCTCGTCATGCCATGAAAAATTCAAACTTCTCTTTTTTCAATTAAAAAAAATTGCATGATTCGCTGAAAAAA

Fln Alignment:

sp_v1.1_unigene8331___IDKLNTFVGKSAVGRYFKLDARNSCFTREIRAGTATFLTMAYILAVNASILTDSGGPCTVADCTSTCSDSSVAASLCHGRSANGTVLSLVSPGVECKFPPVNPGYTACLDRTKKDLIVATVASSLIGCFIMGVFANLPLALAPGMGTNAYFAYTVVGYHGSGSISYKSALAAVFIEGILFLLIAALGFRTKLAKMVPKPVRISSSAGIGLFLAFIGLQSSEGIGLVQYSSSTLVTLGACPKKYMVGLAPVQTFLNGTTELLAGGTVSGDIFCLKGRMESPTFWLGIVGFVIIAYCLVHNVKGAMIYGIVFVTAISWFRHTQVTYFDDTITGNESYDYFKKVVDVHKITGTAGALSFKNFHSGQLWVALITFLYVDLLDTTGTLYSMAKFAGFVDEKGDFEGQYFAFMSDAFAIVIGSLLGTSPVTTFIESSTGIREGGRTGLTALTVSCYXXXXXXXXXXXXSIPPWAVGPPLILVGVLMMKSVLEIDWENMREAIPAFVTLIVMPTTYSIAYGLIGGIGTFIVLHLWDW
Q9SRK7______________LNRLNTYVGSSRVGKRFKLAERNSTFTTELRAGTATFLTMAYILAVNASILSDSGGTCSVSDCIPLCSNPAIEPSQCTGPG-----LRLIQPDVSCKFNPVNPGYAACVEEIRKDLIVATVAASLIGCVIMGLMANLPLALAPGMGTNAYFAYTVVGFHGSGSISYRTALAAVFIEGLIFLFISAIGFRAKLAKLVPKPVRISSSAGIGLFLAFIGLQNNQGIGLVGYSPSTLVTLAACPASSRISLAPVITSANGTVSLLAGGSVSGDIMCIHGRMESPTFWLGIVGFVIIAYCLVKNVKGAMIYGIVFVTAVSWFRNTEVTAFPNTSAGDAAHDYFKKIVDVHVIKHTAGALSFSGINKGHFWEALVTFLYVDILDTTGTLYSMARFAGFVDEKGDFAGQYFAFMSDASAIVIGSLLGTSPVTVFIESSTGIREGGRTGLTAITVAVYFLLAMFFTPLLASIPAWAVGPPLILVGVMMMKSVTEIDWEDMREAIPAFVTMILMPLTYSVAYGLIGGIGSYVVLHLWDW

SNPs (tot: 27)

Position	A %	C %	G %	T %	Probability
867	80			20	0.995493
869	80			20	0.995493
892	33	66			1.0
1068		33	66		1.0
1069			33	66	1.0
1080		33	66		1.0
1084		33	66		1.0
1090		33	66		1.0
1091	33		66		1.0
1095		33		66	1.0
1457		83	16		0.994512
1524		11		88	0.923564
1525	11			88	0.923564
1526		11	88		0.923564
1527			88	11	0.923564
1718	81		18		1.0
1747	20			80	1.0
1749	20		80		1.0
1752	80		20		1.0
1753			80	20	1.0
1760		80		20	1.0
1771	20		80		1.0
1804	33	66			1.0
1908			25	75	0.996473
1919	25			75	0.996473
1922		25		75	0.996473
1923		25		75	0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain