SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene8307

Length: 956 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene8307

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Picea sitchensis RepID=D5ACW3_PICSI	-	-	93%
FL-Next	sp=Phosphoribosylformylglycinamidine cyclo-ligase; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	93%
Blast2go	phosphoribosylformylglycinamidine cyclo-ligase precursor	-	-	86%

Source	ECs	Term	Type	e value	Identity
Blast2go	Phosphoribosylformylglycinamidine cyclo-ligase.	EC:6.3.3.1	-	0.0	86%

Source	KEGGs	Term	Identity
Blast2go	Purine metabolism	00230	86%
Blast2go	Metabolic pathways	01100	86%
Blast2go	Biosynthesis of secondary metabolites	01110	86%

Source	GOs	Term	Type	Identity
Blast2go	purine nucleotide biosynthetic process	GO:0006164	Biological Process	86%
Blast2go	copper ion binding	GO:0005507	Molecular Function	86%
Blast2go	phosphoribosylformylglycinamidine cyclo-ligase activity	GO:0004641	Molecular Function	86%
Blast2go	mitochondrion	GO:0005739	Cellular Component	86%
Blast2go	chloroplast	GO:0009507	Cellular Component	86%

Full-Lengther Next Prediction

SNPs (tot: 5)

Position	A %	C %	G %	T %	Probability
262	12		87		0.992554
344		8	75		0.99999
696	16		83		0.994512
697	16			83	0.994512
831	25		75		0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain