SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene8141

Length: 638 nt

Origin of reads: Biogeco_1 Uagpf Uma

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v1.1_unigene8141 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Acyl-CoA-binding protein (ISS) [Ostreococcus tauri] emb\|CAL54448.1\| Acyl-CoA-binding protein (ISS) [Ostreococcus tauri]	-	-	5.0e-11	60%
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	0.0	73%
Blast2go	unnamed protein product [Vitis vinifera]	-	-	4.51032e-18	85%

Full-Lengther Next Prediction

SNPs (tot: 36)

Position	A %	C %	G %	T %	Probability
228	14		85		0.993533
429	12	87			0.999964
434		12		87	0.999964
441	87		12		0.999964
489		78		21	1.0
490		78	21		1.0
494		78	21		1.0
499		21		78	1.0
500	78	21			1.0
501	21	78			1.0
503			21	78	1.0
504			21	78	1.0
506	78	21			1.0
508		21	78		1.0
509			21	71	1.0
512			21	78	1.0
527			11	88	0.923564
530	10	90			0.90298
531			10	90	0.90298
532			10	90	0.90298
536			10	90	0.90298
537	10		90		0.90298
538		10		90	0.90298
550	11	88			0.923564
551	88		11		0.923564
555		11		88	0.923564
557	87		12		0.992554
561		87	12		0.992554
563		12	87		0.992554
564	12			87	0.992554
565		12		87	0.992554
568		12		87	0.992554
569	87		12		0.992554
595		33		66	0.997452
596		33		66	0.997452
597		33		66	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain