SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene7877

Length: 786 nt

Origin of reads: Biogeco_1 Biogeco_2

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v1.1_unigene7877 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Auxin induced-like protein n=8 Tax=Picea sitchensis RepID=A9NV90_PICSI	-	-	3.0e-32	49%
FL-Next	tr=Auxin induced-like protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	49%
Blast2go	auxin induced-like protein	-	-	3.50682e-33	59%

Source	InterPros	Term	Type	e value	Identity
Blast2go	DOMON domain	IPR005018	-	3.50682e-33	59%
Blast2go	Uncharacterised conserved protein UCP037471	IPR017214	-	3.50682e-33	59%

Full-Lengther Next Prediction

SNPs (tot: 8)

Position	A %	C %	G %	T %	Probability
438		33		66	1.0
494	10			90	0.90298
495	90		10		0.90298
587		71		28	1.0
603	28			71	1.0
623		33	66		1.0
625	50	50			1.0
626	16	33	50		1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain