SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene7710

Length: 1221 nt

Origin of reads: Biogeco_1 Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene7710

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Tonoplast intrinsic protein n=7 Tax=rosids RepID=C9WSP9_HEVBR	-	-	64%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	94%
Blast2go	tonoplast intrinsic protein	-	-	89%

Source	InterPros	Term	Type	Identity
Blast2go	Major intrinsic protein	IPR000425	-	89%
Blast2go	Aquaporin	IPR012269	-	89%
Blast2go	Major intrinsic protein, conserved site	IPR022357	-	89%
Blast2go	Aquaporin-like	IPR023271	-	89%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9NZ54

Fln msg:

Fln protein: MPFRSIAIGRPEEATHPAALKAALAEFISTLIFVFAGEGSGMAFAKLTSDASTTPAGLVAVALAHGLGLFVAVAVGANISGGHVNPAVTFGALVGGHITLLRGILYWIAQLLGSTVACLLLKYTTGGLTTSAFSLSSGVGVGNAVVFEIVMTFGLVYTVYATAVDPKKGTLGTIAPICIGFIVGANILAGGAFDGASMNPARAFGPALVSWTWEHHWIYWVGPLVGGGLAGVIYELFMISEPTHERLSSEDY*

Protein Length: 254

Fln nts: CAGGCGGTAATATAAATAAATTGGTCATGAATaTcAtGGgAAGAaGAAAGCAAGCGTCGTCCAGAGGTGGAGTGTTCGATTCCCTTTGGCTAAAGAATCGTGCACATATTTGTTGGTAACA_-_ATGCCGTTCCGAAGCATTGCGATTGGGAGGCCAGAGGAAGCCACCCACCCGGCTGCTCTCAAGGCCGCCCTGGCGGAATTTATTTCGACGCTCATCTTCGTTTTCGCCGGGGAAGGATCCGGCATGGCTTTCGCCAAGCTTACGAGCGACGCTTCGACGACACCGGCCGGATTGGTAGCCGTAGCTCTGGCACATGGTCTAGGGCTCTTTGTGGCAGTGGCCGTGGGGGCCAACATATCTGGTGGTCACGTTAACCCTGCGGTCACTTTCGGTGCGCTCGTCGGAGGTCACATCACACTACTAAGGGGCATTCTCTACTGGATCGCGCAGCTCCTTGGTTCCACCGTTGCTTGCTTGTTGCTCAAGTACACAACCGGCGGCCTGACAACGTCGGCGTTCTCGTTGTCTTCTGGCGTGGGAGTGGGCAACGCTGTGGTGTTCGAGATCGTGATGACGTTCGGACTGGTGTATACCGTATACGCAACGGCGGTTGACCCGAAGAAGGGCACCTTGGGCACCATTGCCCCGATCTGCATTGGTTTCATCGTGGGCGCCAACATATTGGCCGGCGGCGCCTTCGACGGCGCTTCGATGAACCCGGCCAGGGCATTCGGGCCGGCCCTGGTGAGCTGGACTTGGGAGCACCACTGGATCTATTGGGTCGGTCCTCTTGTGGGTGGAGGCCTCGCTGGCGTTATCTACGAGCTTTTTATGATCTCCGAGCCAACCCACGAACGGTTGTCCTCGGAGGACTACTGA___GTTGGATAGGAACAATCATGTAATAAAGTGGCTTCTCTGTGTCGTGGCAAATTGGTTTGTTAGCGTCGTGGCCTTTGGTTAGCCACGCCGATTCCATGAACAGTCGGCCCTCATCATGCAAGTCAGTTTGTGTGCCGTGTGTGTTGTTGACGGATTTGTCTATTGATTACAATTGATATGGATTTTAATGTGTTCATTTCCATATTGTCGTAAGTGGTGAGCTAAGTATCGGAAGTTCGGAACATTAGCGTCATATCAGTGACCAGAAACTTCAAGAAATTGAACAATAATTGTGCATAGTGGTTCCCTCACTACGGTATTTGCAAATAGCTTTAACAAAA

Fln Alignment:

sp_v1.1_unigene7710___MPFRSIAIGRPEEATHPXXXXXXXXEFISTLIFVFAGEGSGMAFAKLTSDASTTPXXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGALVGGHITLLRGILYWIAQLLGSTVACXXXXXXXXXXXXSAFSLSSGVGVGNAVVFEIVMTFGLVYTVYATAVDPKKGTLGTIAPICIGFIVGANILAGGAFDGASMNPARAFGPALVSWTWEHHWIYWXXXXXXXXXXXXIYELFMIS-EPTHERLSSEDY
A9NZ54______________MPFRGVAIGRPEEVTHPTALKAALAELISTLIFVFAGEGSGMAFAKLTSDASTTPAGLVAVALAHGLGLFVAVAVGANISGGHVNPAVTFGALVGGHITLLRGILYWIAQLIGATVACLLLKYTTGGLSTSAFSLSSGVGVGNALVFEIVMTFGLVYTVYATAIDPKKGTLGTIAPICIGFIVGANILAGGAFDGASMNPARAFGPALVSWTWENHWIYWVGPLLGGGLAGVIYELFMISNEPTHERLSSEDY

SNPs (tot: 8)

Position	A %	C %	G %	T %	Probability
1041		91	8		0.999766
1075		9		90	0.999872
1078	10			90	0.999898
1079	10			90	0.999898
1080	10	5		85	0.999793
1082	12	81			0.999943
1111	18	81			0.999994
1147			80	20	0.999996

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain