SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene7374

Length: 722 nt

Origin of reads: Biogeco_1 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene7374

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Probable protein phosphatase 2C 57 n=4 Tax=Oryza sativa RepID=P2C57_ORYSJ	-	-	71%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	72%
Blast2go	protein phosphatase 2c	-	-	78%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Protein phosphatase 2C-like	IPR001932	-	0.0	78%
Blast2go	Protein phosphatase 2C	IPR015655	-	0.0	78%

Full-Lengther Next Prediction

SNPs (tot: 36)

Position	A %	C %	G %	T %	Probability
311			33	66	1.0
313		33	66		1.0
314			33	66	1.0
318		33		66	1.0
319		33	66		1.0
320	66			33	1.0
321	66			33	1.0
326	66		33		1.0
328	66	33			1.0
330	66	33			1.0
331	66			33	1.0
333	11		88		0.923564
337	75	25			1.0
340		25		75	1.0
341	75		25		1.0
347	75	25			1.0
352			25	75	1.0
353	75		25		1.0
360		25	75		1.0
372			13	86	0.999973
375		86	13		0.999973
376	86			13	0.999973
377			13	86	0.999973
378	13			86	0.999973
381			86	13	0.999973
382	86		13		0.999973
385		86		13	0.999973
388	13	86			0.999973
390		86		13	0.999973
392	13	86			0.999973
439	87			12	0.999964
440	87	12			0.999964
671	40		60		1.0
687	62		37		1.0
704			20	80	0.995493
705			80	20	0.995493

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain