SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
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ECs
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene7087

Length: 927 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene7087

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	POLD4; POLD4 (POLYMERASE DELTA 4); DNA-directed DNA polymerase; K03505 DNA polymerase delta subunit 4	-	-	2.0e-21	46%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	84%
Blast2go	protein	-	-	0.0	62%

Full-Lengther Next Prediction

SNPs (tot: 19)

Position	A %	C %	G %	T %	Probability
656			9	90	0.999842
657	90		9		0.999842
658	9			90	0.999842
659	9			90	0.999842
661		90	9		0.999842
663	9		90		0.999842
665	9	90			0.999842
668		9		90	0.999842
670		90	9		0.999842
673	9			90	0.999872
676			9	90	0.999872
678		10		90	0.999898
680		89	10		0.999919
682	10			89	0.999919
683	10			89	0.999919
684		89		10	0.999919
685	10	89			0.999919
775		83		16	0.999991
875	14		85		0.993533

SSRs (tot: 1)

Start position	End position	Sequence	Length
200	212	AGA AGA AGA AGA A	13

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain