SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene6963

Length: 984 nt

Origin of reads: Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene6963

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	DNA repair and recombination protein radB, putative n=1 Tax=Ricinus communis RepID=B9SYN5_RICCO	-	-	7.0e-29	52%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	92%
Blast2go	dna repair and recombination protein	-	-	0.0	71%

Source	GOs	Term	Type	Identity
Blast2go	somatic cell DNA recombination	GO:0016444	Biological Process	71%
Blast2go	regulation of response to biotic stimulus	GO:0002831	Biological Process	71%
Blast2go	DNA repair	GO:0006281	Biological Process	71%

Source	InterPros	Term	Type	e value	Identity
Blast2go	DNA recombination and repair protein Rad51, C-terminal	IPR013632	-	0.0	71%

Full-Lengther Next Prediction

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
744	83			16	0.994512

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain