SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene6685

Length: 1335 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene6685

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9S250_RICCO	-	-	37%
FL-Next	sp=Interactor of constitutive active ROPs 2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress).	-	-	38%
Blast2go	atp binding	-	-	59%

Source	GOs	Term	Type	e value	Identity
Blast2go	phosphoprotein binding	GO:0051219	Molecular Function	0.0	59%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Protein of unknown function DUF827, plant	IPR008545	-	0.0	59%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: sp_plants

Fln subject: Q9ZQC5

Fln msg: Distance to subject end: 279 aas, your sequence is shorter than subject: 321 - 583

Fln protein: MLTSKSRSGSADMPHRTSPGTPRHSKQSRGFGSTDSDTTPIQTGRLSLDKAPSKIPDRRSPRSTLPEKRVTKGPDLQQQLNQAQENLKSAKEQLALVEKAKSRALEELEESKKAFDEANVRLSEALVAEKRALEKSESEKFRADELEQATIESAQKRDQAWQSELEAVQRQHALDVAALQSANQELQRVKQDLSIAMESKATVAKQAEEAVNASKANAKKAEELSAEMCSLKEALDSAYASRSMVEDEKAASAAKWESEAKEATAMATKANQEVQLLKKELANVKDLELKLSDAYDLLEKLNFDLLAAKESESRAGMLADE

Protein Length: 322

Fln nts: ATGGGGGCTCTTGTGGGTGAGGGGGATCTCAATAATACAGTAGTGTTGGTGGGATGTGTGCCGAGGAGCAGGAGCAGAATGGTGGTTTGAGCGTTTGTAGTCTACCATTGCCATTGAAATAAATCGTGTCAGTAGTATGTTTGGGTTCCTTCGGCATCTTATGTGAAATGTGAGATTCTATTTGTAGGCCATCTCAGATCGTTTTGCATTTGTTCTTTTGCTTGGAATGGGAGGAGAGGACACCAGCAGGTCAGTAGGTAGTAGGTGTGGATTTTGAAGAAGGCACATTGTGGTGTGGAAGCTTCTTTACAAGAAAAACTGCTTTCAGACGGTAGAACCTCTGCTGCAATCCTTTGCAAAGGAGGAGAAA_-_ATGCTGACATCCAAATCAAGATCTGGTTCGGCAGATATGCCTCACCGGACGTCTCCTGGTACCCCTAGACATAGTAAGCAAAGCAGAGGTTTTGGGAGTACAGACTCGGACACAACTCCGATACAGACTGGTCGGCTATCGTTGGACAAGGCCCCTTCCAAAATACCAGACCGCAGATCTCCCAGGAGCACATTACCTGAGAAACGAGTCACCAAAGGACCCGATCTTCAGCAACAACTGAATCAAGCTCAAGAAAATTTGAAGAGTGCTAAGGAACAATTGGCCTTGGTAGAGAAAGCTAAGTCCAGGGCTCTTGAAGAGTTGGAAGAGAGTAAGAAGGCATTTGATGAAGCCAATGTGAGATTGAGTGAGGCTCTGGTGGCTGAGAAGAGAGCATTGGAGAAATCTGAGAGTGAGAAGTTTCGAGCCGATGAGCTTGAGCAGGCCACCATTGAGTCTGCTCAGAAGAGGGATCAGGCCTGGCAGTCTGAACTTGAAGCTGTGCAGAGACAGCATGCTCTTGATGTGGCTGCCTTGCAATCTGCAAACCAAGAGCTTCAGCGGGTCAAGCAAGACCTCTCCATTGCGATGGAGTCTAAGGCCACCGTAGCCAAACAGGCCGAGGAAGCTGTCAATGCTTCAAAGGCCAATGCCAAAAAAGCAGAGGAACTGTCCGCAGAGATGTGTTCTCTGAAAGAGGCTCTCGATTCGGCATATGCATCACGGTCGATGGTTGAGGATGAAAAGGCTGCCAGTGCTGCAAAATGGGAATCAGAAGCCAAAGAAGCAACTGCAATGGCAACTAAGGCTAATCAAGAAGTTCAATTATTGAAGAAAGAATTGGCCAATGTCAAGGATCTTGAGTTGAAGCTATCTGATGCCTATGATCTGTTGGAAAAACTCAACTTTGATCTGCTTGCTGCTAAAGAATCTGAATCCAGAGCTGGCATGTTGGCTGATGAAGC

Fln Alignment:

sp_v1.1_unigene6685___MLTSKSRSGSADMPHRTSPGTPRHSKQSRGFGSTDSDTTPIQTGRLSLDKAPSKIPDRRSPRSTLPE---KRVTKGPDXXXXXXXXXXXXKSAKEQLALVEKAKSRALEELEESKKAFDEANVRLSEALVAEKRALEKSESEKFRADELEQATIESAQKRDQAWQSELEAVQRQHALDVAALQSANQELQRVKQDLS
Q9ZQC5______________MQTPKPRPGSLEVPQKKSPASTPKTARKLKTSESDPVSSPNTKIRTPKTQSPKVVADRRSPRTPVNEIQKKRTGKTPELASQISQLQEELKKAKEQLSASEALKKEAQDQAEETKQQLMEINA-----------------SEDSRIDELRKLS----QERDKAWQSELEAMQRQHAMDSAALSSTMNEVQKLKAQLS

SNPs (tot: 2)

Position	A %	C %	G %	T %	Probability
1013			28	71	1.0
1062		20		80	0.995493

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain