SustainPineDB

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Assembly info
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene6678

Length: 362 nt

Origin of reads: Uma

UniGene Fasta

>sp_v1.1_unigene6678
ATACACGCAAAGGAGGATTTACAGTCATAGATAACTATGATGCACCCTGAAGAAGCTCAGAAGAGGACGTCGAATGATAACAAGTACACTCCGATTCCTCTGGAAGGAGGAGGAGATGGAGTTCCTGTTTCTTTCCATGAAGAAGCCAAAGAAGCTCAGAAGAGGACGTCGAATGATAACAAGTACACTCCGATTCCTCTGGAAGGAGGAGATGGAGTTCCTGTTCCCTTCGATGCGAATCTAGCAGTTCAGCGAGACCTGAAGATCACACAAATCAACGTTCCCGAGAAACATGGCTGGAGGAAGCTGTTGGCTTATGTTGGGCCCGGATTTTTGGTCGCAATTGCCTATATGGACCCAGG

Ace file of the UniGene sp_v1.1_unigene6678

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Putative NRAMP metal ion transporter 1 n=2 Tax=Oryza sativa RepID=Q653V6_ORYSJ	-	-	3.0e-05	55%
FL-Next	sp=Metal transporter Nramp3; Oryza sativa subsp. japonica (Rice).	-	-	0.0	55%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Natural resistance-associated macrophage protein	IPR001046	-	0.0	-

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: sp_plants

Fln subject: Q653V6

Fln msg: Distance to subject end: 482 aas, your sequence is shorter than subject: 108 - 550

Fln protein: MMHPEEAQKRTSNDNKYTPIPLEGGGDGVPVSFHEEAKEAQKRTSNDNKYTPIPLEGGDGVPVPFDANLAVQRDLKITQINVPEKHGWRKLLAYVGPGFLVAIAYMDP

Protein Length: 109

Fln nts: ATACACGCAAAGGAGGATTTACAGTCATAGATAACT_-_ATGATGCACCCTGAAGAAGCTCAGAAGAGGACGTCGAATGATAACAAGTACACTCCGATTCCTCTGGAAGGAGGAGGAGATGGAGTTCCTGTTTCTTTCCATGAAGAAGCCAAAGAAGCTCAGAAGAGGACGTCGAATGATAACAAGTACACTCCGATTCCTCTGGAAGGAGGAGATGGAGTTCCTGTTCCCTTCGATGCGAATCTAGCAGTTCAGCGAGACCTGAAGATCACACAAATCAACGTTCCCGAGAAACATGGCTGGAGGAAGCTGTTGGCTTATGTTGGGCCCGGATTTTTGGTCGCAATTGCCTATATGGACCCAGG

Fln Alignment:

sp_v1.1_unigene6678___LKITQINVPEKHGWRKLLAYVGPGFLVAIAYMDP
Q653V6______________IDVDQIVIPEKNSWKNLFSYIGPGFLVSIAYIDP

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain