SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene6599

Length: 944 nt

Origin of reads: Uagpf

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene6599

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Trehalose 6-phosphate phosphatase n=2 Tax=Nicotiana tabacum RepID=D4QAK5_TOBAC	-	-	2.0e-38	75%
FL-Next	tr=Trehalose-phosphate phosphatase; Nicotiana tabacum (Common tobacco).	-	-	0.0	39%
Blast2go	attppa trehalose-phosphatase	-	-	4.40566e-38	87%

Source	ECs	Term	Type	e value	Identity
Blast2go	Trehalose-phosphatase.	EC:3.1.3.12	-	4.40566e-38	87%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Starch and sucrose metabolism	00500		4.40566e-38	87%

Source	GOs	Term	Type	e value	Identity
Blast2go	trehalose biosynthetic process	GO:0005992	Biological Process	4.40566e-38	87%
Blast2go	trehalose-phosphatase activity	GO:0004805	Molecular Function	4.40566e-38	87%

Full-Lengther Next Prediction

SNPs (tot: 20)

Position	A %	C %	G %	T %	Probability
376		33	66		1.0
379		33	66		1.0
380		66	33		1.0
383	33		66		1.0
385	66	33			1.0
386			66	33	1.0
387	66			33	1.0
388			33	66	1.0
389			33	66	1.0
394		50		50	1.0
396	50	50			1.0
397	50			50	1.0
399	50			50	1.0
636	20		80		0.995493
637	20		80		0.995493
640		80		20	0.995493
644	20	80			0.995493
645	20	80			0.995493
648		80		20	0.995493
651	20	80			0.995493

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain