SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene6567

Length: 692 nt

Origin of reads: Biogeco_1 Uagpf Uma

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v1.1_unigene6567 (antisense)

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	DUF1423 domain containing protein	-	-	66%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	50%
Blast2go	protein binding	-	-	75%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Protein of unknown function DUF1423, plant	IPR004082	-	0.0	75%

Full-Lengther Next Prediction

SNPs (tot: 25)

Position	A %	C %	G %	T %	Probability
246	12			87	0.992554
247			12	87	0.992554
249		87	12		0.992554
254		87	12		0.992554
257	12	87			0.992554
259		87	12		0.992554
260			12	87	0.992554
261		87		12	0.992554
263	12			87	0.992554
264		12		87	0.992554
266	12		87		0.992554
268	87		12		0.992554
437		14		85	0.993533
481		83		16	0.994512
636			25	75	0.996473
641			25	75	0.996473
642	25			75	0.996473
643		25		75	0.996473
645	75		25		0.996473
650	66		33		0.997452
651	66		33		0.997452
654	33	66			0.997452
655		33		66	0.997452
658	66	33			0.997452
659			33	66	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain