SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene6346

Length: 942 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene6346

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	small nuclear ribonucleoprotein sm d1, putative; K11087 small nuclear ribonucleoprotein D1	-	-	94%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	98%
Blast2go	small nuclear ribonucleoprotein sm d1	-	-	98%

Source	GOs	Term	Type	e value	Identity
Blast2go	nucleolus	GO:0005730	Cellular Component	0.0	98%
Blast2go	plasma membrane	GO:0005886	Cellular Component	0.0	98%

Source	InterPros	Term	Type	Identity
Blast2go	Like-Sm ribonucleoprotein (LSM) domain	IPR001163	-	98%
Blast2go	Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type	IPR006649	-	98%
Blast2go	Like-Sm ribonucleoprotein (LSM)-related domain	IPR010920	-	98%

Full-Lengther Next Prediction

SSRs (tot: 1)

Start position	End position	Sequence	Length
433	450	TGGACG TGGACG TGGACG	18

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain