SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene6112

Length: 964 nt

Origin of reads: Biogeco_1 Biogeco_2 Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene6112

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	senescence-associated protein-related	-	-	5.0e-20	32%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	67%
Blast2go	protein	-	-	4.08872e-27	47%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Protein of unknown function DUF581	IPR007650	-	4.08872e-27	47%

Full-Lengther Next Prediction

SNPs (tot: 21)

Position	A %	C %	G %	T %	Probability
326		50		50	1.0
327	75		25		0.996473
336	20			80	0.995493
349	80		20		0.995493
384			80	20	0.995493
442		16	83		0.994512
488		20	80		0.995493
664	72	27			1.0
770	75			8	0.99999
803	10		90		0.90298
804		90		10	0.90298
806		10	90		0.90298
808	10		90		0.90298
812	90	10			0.90298
813	90			10	0.90298
815			90	10	0.90298
818		10	90		0.90298
822	10	90			0.90298
826		88		11	0.923564
827	88			11	0.923564
829	88	11			0.923564

SSRs (tot: 1)

Start position	End position	Sequence	Length
915	927	CTG CTG CTG CTG C	13

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain