SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene5601

Length: 1085 nt

Origin of reads: Biogeco_1 Biogeco_2 Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene5601

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	ATLIP1; ATLIP1 (Arabidopsis thaliana lipase 1); galactolipase/ hydrolase/ phospholipase/ triacylglycerol lipase (EC:3.1.1.3)	-	-	38%
FL-Next	sp=Triacylglycerol lipase 1; Arabidopsis thaliana (Mouse-ear cress).	-	-	38%
Blast2go	protein	-	-	61%

Source	ECs	Term	Type	e value	Identity
Blast2go	Triacylglycerol lipase.	EC:3.1.1.3	-	0.0	61%

Source	KEGGs	Term	Type	Identity
Blast2go	Glycerolipid metabolism	00561		61%
Blast2go	Metabolic pathways	01100		61%
Blast2go	Galactolipase.	EC:3.1.1.26	-	61%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Glycerolipid metabolism	00561		0.0	61%

Source	GOs	Term	Type	Identity
Blast2go	triglyceride lipase activity	GO:0004806	Molecular Function	61%
Blast2go	phospholipase activity	GO:0004620	Molecular Function	61%
Blast2go	galactolipase activity	GO:0047714	Molecular Function	61%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Partial AB-hydrolase lipase domain	IPR006693	-	0.0	61%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: sp_plants

Fln subject: Q71DJ5

Fln msg: Distance to subject end: 64 aas, your sequence is shorter than subject: 341 - 393

Fln protein: MAGLGNLWVSLLFLSLCLALNWSVQSVQLGPKEAAHSVLNAHGICGTFVWSKGYNCAEFMVPTKDGFLLSVQRMSSPRFRTVDKEPTFLYHGIMQGGEAWVLNEPRESLAFIMADSGYDVWIGNTRTTMFSYGHTIYNRTQKEFWDWNADDLVAYDLPKMLEFVSDATGKQILYVGYSEGAMAGFAGFTNSEMANLVKKAGMLSPVAYLNHVTSPLIQAAAWLYIDRVVLSDGDYEFSLSGVQGSATIQSLCRRTRSNCMDLSSLVTGPSCCTNKSMTAYYNKYQQSTSTKNLAQMAQLLRSGRFGKYDYGLAGNLANYLTITPPSYDLSAIPGHLPFSSA

Protein Length: 342

Fln nts: ATGGGGAGAGCCCAAACACAGTTTACTGCTAGGAATTTCCTGCCACACCTCTAGAGAAACCA_-_ATGGCGGGGCTCGGAAATTTGTGGGTTTCCCTTCTCTTTCTGTCACTATGTCTGGCGTTGAACTGGTCTGTGCAATCTGTGCAATTAGGTCCCAAGGAAGCAGCTCATTCGGTCTTGAATGCCCATGGAATATGTGGAACGTTCGTCTGGTCTAAAGGATATAACTGTGCAGAATTTATGGTCCCAACGAAGGATGGATTTCTACTGTCTGTGCAAAGGATGTCCAGTCCAAGATTTCGCACTGTCGATAAGGAACCCACTTTTCTTTATCACGGAATAATGCAGGGGGGTGAAGCATGGGTTCTGAACGAGCCTCGTGAGTCTCTGGCGTTCATCATGGCAGACTCTGGGTATGATGTTTGGATTGGAAACACGCGTACAACTATGTTCAGCTATGGACACACCATATACAATAGAACGCAGAAGGAATTCTGGGATTGGAATGCTGATGATCTCGTAGCCTATGATCTCCCAAAAATGCTGGAATTTGTCAGTGATGCCACCGGGAAACAAATTCTCTATGTTGGTTATTCTGAGGGCGCAATGGCAGGATTCGCCGGATTTACAAATAGTGAAATGGCAAACCTTGTGAAGAAGGCTGGCATGCTTAGTCCTGTCGCCTACTTAAACCATGTCACTTCTCCCTTGATCCAAGCTGCTGCCTGGCTATATATAGATCGGGTCGTATTGTCTGATGGTGATTACGAGTTCAGCCTCTCCGGTGTACAAGGCAGCGCTACTATTCAATCACTATGCAGGAGGACACGATCCAATTGCATGGACCTATCATCATTAGTTACAGGGCCGAGTTGCTGCACGAACAAGTCGATGACCGCATACTACAACAAATACCAGCAGTCCACATCCACGAAGAACCTTGCACAGATGGCTCAGTTGCTGCGTTCGGGCAGATTTGGAAAATACGACTACGGGTTAGCAGGAAATTTGGCGAATTATTTGACCATCACCCCTCCCTCTTACGATCTGTCTGCTATCCCAGGGCACTTACCATTTTCTAGCGCA

Fln Alignment:

sp_v1.1_unigene5601___HGICGTFVWSKGYNCAEFMVPTKDGFLLSVQRMSSPRFRTVDKEPTFLYHGIMQGGEAWVLNEPRESLAFIMADSGYDVWIGNTRTTMFSYGHTIYNRTQKEFWDWNADDLVAYDLPKMLEFVSDATGKQILYVGYSEGAMAGFAGFTNSEMANLVKKAGMLSPVAYLNHVTSPLIQAAAWLYIDRVVLSDGDYEFSLSGVQGSATIQSLCRRTRSNCMDLSSLVTGPSCCTNKSMTAYYNKYQ-QSTSTKNLAQMAQLLRSGRFGKYDYGLAGNLANYLTITPPSYDLSAIPGHLP
Q71DJ5______________NSLCADLIHPANYSCTEHSIQTKDGYILALQRVASLGPRLQSGPPVLLQHGLFMAGDVWFLNSPKESLGFILADHGFDVWVGNVRGTRYSYGHVTLSDTDKEFWDWSWQDLAMYDLAEMIQYLYSISNSKIFLVGHSQGTIMSFAALTQPHVAEMVEAAALLCPISYLDHVTAPLVERMVFMHLDQMVVALGLHQINFRSDMLVKLVDSLC-EGHMDCTDFLTSITGTNCCFNASKIEYYLDYEPHPSSVKNIRHLFQMIRKGTFAQYDYGYFKNLRTYGLSKPPEFILSHIPASLP

SNPs (tot: 10)

Position	A %	C %	G %	T %	Probability
166		75	25		0.996473
176		50		50	1.0
311		25		75	0.996473
578	33			66	0.997452
782		33		66	0.997452
796		33	66		0.997452
819	50	50			1.0
965		76		23	1.0
1000		41		58	1.0
1047		66		33	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain