SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene5545

Length: 800 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene5545

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	dihydroneopterin triphosphate pyrophosphohydrolase	-	-	4.0e-38	57%
FL-Next	sp=Nudix hydrolase 1; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	59%
Blast2go	protein	-	-	0.0	70%

Source	GOs	Term	Type	Identity
Blast2go	response to DNA damage stimulus	GO:0006974	Biological Process	70%
Blast2go	8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity	GO:0008413	Molecular Function	70%
Blast2go	dihydroneopterin triphosphate pyrophosphohydrolase activity	GO:0019177	Molecular Function	70%
Blast2go	cytosol	GO:0005829	Cellular Component	70%

Source	InterPros	Term	Type	Identity
Blast2go	NUDIX hydrolase domain	IPR000086	-	70%
Blast2go	NUDIX hydrolase domain-like	IPR015797	-	70%
Blast2go	NUDIX hydrolase, conserved site	IPR020084	-	70%
Blast2go	NUDIX hydrolase	IPR020476	-	70%

Full-Lengther Next Prediction

SNPs (tot: 9)

Position	A %	C %	G %	T %	Probability
105			15	84	0.999986
106		84	15		0.999986
107			15	84	0.999986
226		11		88	0.923564
260	88	11			0.923564
275		12		87	0.992554
350	88		11		0.923564
368	88		11		0.923564
728		25		75	0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain