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Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: D5A9L4

Fln msg: Warning!, your query overlaps and the subject is separated, and possible frame ERROR between 592 and 594, Distance to subject end: 17 aas, your sequence is shorter than subject: 353 - 440

Test code: 0

Test Code was used to find complete genes when there was not found a reliable orthologue. The best ORF (Open Reading Frame) is shown, and only ORFs > 200pb were analyzed. Your ORF will be more reliable if a stop codon was found before the start codon. A Test Code value > 0.95 means the ORF is probably coding. A Test Code value < 0.74 means the ORF is probably non-coding. Test Code values in between 0.74 and 0.95 mean it is uncertain whether the ORF is coding or not.

Fln protein: RIGACRPECFPRVxxxEYCKITEEEEDIASRETIYPSTDA*PLLSLSLKMPNVMRFSGERLTLPVMPSACGQKKKGIPGLSLVADQRYLPYKRPNPHHEAEKIIPALLFLHHYEQSNHTLYWFSRPDEISEWGKGLLKAFSVQTNVEYIDFPDKKNATVCFEDAIVFSAGTSLYYVPDDETNDWLRRRVLQYCSIPIx*VNASWPPRKAAILDRISGSRNLQNKHAIEQVLSQELKIDVRPGYSGNGTFCEQVREVAEEDLIVVPHGSQNVNLLFARKGAVVIEIFPYLYYTTALRNYTHAAQLHVYPLLGDIPKKSFFLHPLSIVGWDFCFEKFRWCKYYSRKQVVHADIEE

Protein Length: 354

Fln nts: CGAATCGGGGCTTGCAGACCGGAGTGCTTTCCTCGTGTTxxxxxxxxxGAGTACTGTAAGATCACAGAAGAAGAGGAAGATATTGCATCCAGAGAAACAATATATCCATCCACAGATGCGTGACCTTTGCTGTCCCTGAGTTTGAAAATGCCAAATGTCATGCGTTTTTCTGGGGAGCGTTTGACTTTACCTGTAATGCCTTCTGCTTGTGGTCAGAAAAAGAAAGGAATTCCTGGCTTATCTTTGGTAGCAGACCAGCGATATCTTCCATACAAAAGGCCGAATCCTCATCATGAGGCAGAAAAGATTATTCCCGCCCTTCTTTTTTTACACCATTATGAACAGAGTAATCACACTTTATATTGGTTCTCAAGACCAGATGAAATCTCTGAGTGGGGAAAGGGTTTACTGAAAGCTTTCAGCGTGCAAACAAATGTCGAGTACATTGATTTTCCTGACAAGAAAAATGCTACTGTTTGCTTTGAAGATGCTATAGTTTTTTCAGCTGGTACGAGCCTTTACTATGTACCTGATGATGAGACAAATGATTGGCTCCGGCGGCGTGTACTACAATATTGCTCTATTCCAATTxxxTAGGTTAATGCCTCTTGGCCTCCTAGAAAGGCTGCAATATTGGATCGAATAAGTGGTTCACGAAACCTGCAAAATAAACATGCGATCGAACAAGTATTGTCCCAGGAACTTAAAATCGATGTGAGGCCTGGTTATAGTGGCAATGGCACATTTTGTGAACAGGTGCGTGAAGTTGCAGAAGAGGACCTGATAGTTGTTCCGCATGGTTCACAAAATGTTAACCTTCTTTTTGCTCGCAAAGGGGCTGTTGTGATCGAGATTTTTCCTTATTTATATTACACAACGGCTTTGAGGAACTATACACATGCAGCACAATTGCATGTCTATCCACTTCTTGGAGATATTCCGAAAAAGAGCTTCTTCTTGCATCCCCTATCTATTGTGGGTTGGGATTTTTGCTTTGAGAAATTTCGCTGGTGTAAATATTATTCACGTAAACAAGTTGTTCATGCTGACATTGAAGAGC

Fln Alignment:

sp_v1.1_unigene5337___RIGACRPECFPRVKGxxxxxxRVEYCKITEEEEDIASRETIYPSTDA*PLL-SLSLKMPNVMRFSGERLTLPVMPSACGQKKKGIPGLSLVADQRYLPYKRPNPHHEAEKIIPALLFLHHYEQSNHTLYWFSRPDEISEWGKGLLKAFSVQTNVEYIDFPDKKNATVCFEDAIVFSAGTSLYYVPDDETNDWLRRRVLQYCSIPIVxVNASWPPRKAAILDRISGSRNLQNKHAIEQVLSQELKIDVRPGYSGNGTFCEQVREVAEEDLIVVPHGSQNVNLLFARKGAVVIEIFPYLYYTTALRNYTHAAQLHVYPLLGDIPKKSFFLHPLSIVGWDFCFEKFRWCKYYSRKQVVHADIE
D5A9L4______________RIGACRPECFPRVKGxxxxxxQVEYCKITEEEEDIASTETIYPSTDEKNLLLPKCLKMPNFMRFSGERLTLPVMPSVCGQEKKGIPGLSLVADQRYLPYKKPNPHHEAEKIIPALLFLQHYEQSNHTLYWFSRPDEISEWGKGLLEAFSMQTNVKYVEFPDKKNGTVCFEDAIVFSAGTSLHYVPDYDTNDWLRQHILQYCSIPIVxVNASWPPRKAAILDRISGSRKLQNIHV--------------------------VREVAEEDLLVVPHGSQNVNLLFARKGAVVIEIFPYLYYTTALKNYTHAAQLHVYSLLGDIPNKSFVLHPLSIVGWDFCFEKFRWCKYYSRKQVVHADIE