SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene5241

Length: 1901 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene5241

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	PREDICTED: similar to Bifunctional nitrilase/nitrile hydratase NIT4B n=1 Tax=Vitis vinifera RepID=UPI0001985AF6	-	-	78%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	91%
Blast2go	nitrilase 2	-	-	88%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: B8LLB3

Fln msg:

Fln protein: MSIISIPEVEVEMGSASPNARTLRATVVQASTVFYDTPATLDKAERLIAEGAAYGSQLLVFPEAFIGGYPRGSNFGVIIGNRTFKGREEFRKYHASAIDVPGPEVDRISAAAAKYKVHVIMGVIERAGFTLYCTVLFFDSQGRFLGKHRKLMPTALERVIWGFGDGSTLPVYDTSIGRVGALICWENRMPLLRTALYAKGVELYCAPTADARESWQASMLHIALEGGCFVLSANQFCRRKDYPPPPDYVFGGSEENMSPETVVCAGGSVIISPTGTVLAGPNFEGEALITADLDFGEIVRAKFDFDVVGHYARPEVLKLTVNDYPLNPVTFSSGIAASEKKDSENV*

Protein Length: 348

Fln nts: CGTCGTGACCTTGGCTGTCACTCAAGTTGCACGAGAATTTCCACAGCTAGCCGAGATTCTGAGTCAGGTTCAATACTAAATCATTTCTGTCTGAGTGTGTTATGTGTGGTTGGTGGAAAATGACAGAAGATTAGAAAACGGAAGAGCAGATTTTAATGACTGGACGACGAGGAAAAGGCGATAAGCGACGTGACACAAAATGAAAATGTGGAGGGGATGGCATTTTACTGGGTGAGGTCTCCCACAAGGAGAATTGTTGCAGCTCTTCTTCTGGCCGGCGGAATTGGGTGTTTTGTGTGGGGTGCTCACCTCTCCTACCAAAACGTGGCTCCCCAACAGGCTCGCATACAGAAGCGCAACGAGTTCATCAGAAAACGCCTGCAGGCGCGACGATCCGGCAACTAGCCTAACGACCGACTAATGTTTGATTCCAACTAGCCTCCGGTGAATAGAATCATCGTAATTATCGTCATCATCAGCAGCA_-_ATGTCTATTATAAGCATCCCCGAAGTCGAAGTTGAAATGGGCTCGGCATCGCCCAACGCCAGGACTCTTCGAGCCACTGTTGTTCAGGCCTCCACTGTCTTCTACGACACCCCTGCTACTCTCGATAAAGCAGAAAGATTGATAGCAGAAGGTGCTGCTTATGGGTCACAGTTGCTTGTGTTTCCTGAAGCTTTTATTGGTGGCTATCCTCGAGGTTCTAATTTTGGTGTTATAATTGGAAATCGCACTTTTAAGGGTCGGGAGGAGTTCCGTAAATACCATGCTTCTGCTATTGATGTGCCAGGTCCAGAAGTAGATAGGATATCAGCTGCAGCTGCAAAATATAAAGTGCATGTAATAATGGGTGTGATAGAGCGAGCAGGCTTCACACTGTATTGCACTGTTCTTTTCTTTGATTCTCAAGGAAGATTCCTAGGGAAGCACCGTAAACTGATGCCAACAGCTTTGGAGCGTGTGATTTGGGGTTTTGGTGATGGATCTACCTTACCTGTGTATGACACATCAATTGGGCGTGTGGGTGCACTCATATGCTGGGAAAACCGAATGCCTCTTTTGAGAACAGCTTTGTATGCAAAAGGAGTGGAACTTTATTGTGCACCAACTGCTGATGCAAGAGAGTCATGGCAGGCATCAATGCTTCATATAGCTCTGGAGGGTGGATGCTTTGTGCTCTCAGCTAATCAGTTCTGCAGAAGAAAGGACTACCCTCCTCCACCAGACTATGTCTTTGGAGGTTCAGAGGAGAATATGTCTCCAGAGACTGTTGTATGTGCGGGTGGAAGTGTTATTATTTCTCCTACTGGTACTGTATTGGCAGGGCCCAATTTTGAAGGGGAGGCTCTAATTACTGCAGATCTTGATTTTGGTGAAATAGTGCGAGCAAAATTTGATTTTGATGTGGTTGGGCACTATGCAAGACCTGAAGTGTTGAAATTGACGGTAAATGACTATCCATTGAATCCTGTTACATTTTCTTCAGGGATAGCAGCATCAGAAAAAAAGGACAGTGAGAATGTGTAA___ATTTAATCTGCAAGCATGGCCAAGGCCCAATACATTCAGATGCTCCCTGAATGGATTTCAGAATTGTCTTAATGGCCAACTATGCTACCATATGGCATGACGAATAGGCTCGAGCATGAGTAGAAGGAACAATTTGTTATTGAAAAACAGTTGTTTAAGTATCCAAAATGTCTAACTACAGAGACCATCTTTTCTGTAAAATTTATCTTTGTATATAACAAGATTGAGCATGCCTAGAATAGAAAGAACAATTTGCTATTGAGTAATCAGGGAAACATTTATATAACTATTCAAAATGTAGAACTACAGACACCATAGCTTTGTAATGATTTATATTTGCATATAGCAAAATATAGACATTATTTTATGGAAAGAG

Fln Alignment:

sp_v1.1_unigene5241___PEVEVEMGSASPNARTLRATVVQASTVFYDTPATLDKAERLIAEGAAYGSQLLVFPEAFIGGYPRGSNFGVIIGNRTFKGREEFRKYHASAIDVPGPEVDRISAAAAKYKVHVIMGVIERAGFTLYCTVLFFDSQGRFLGKHRKLMPTALERVIWGFGDGSTLPVYDTSIGRVGALICWENRMPLLRTALYAKGVELYCAPTADARESWQASMLHIALEGGCFVLSANQFCRRKDYPPPPDYVFGGSEENMSPETVVCAGGSVIISPTGTVLAGPNFEGEALITADLDFGEIVRAKFDFDVVGHYARPEVLKLTVNDYPLNPVTFSSGIAASEKKDSENV
B8LLB3______________PEVEVEMRPASPNARTLRATVVQASTVFYDTPATVDKAERLIAEGAAYGSQLLVFPEGFIGGYPRGSNFGAVVGNRSFKGREEFRKYYASAIDVPGPEVERIAAAAAKYKVHVIMGVIERAGFTLYCTALFFDSQGRFLGKHRKMMPTALERVIWGFGDGSTLPVYDTTIGRLGALICWENRMPLLRTALYAKGVELYCAPTADARESWQASMLHIAMEGGCFVLSANQFCRRKDYPPPPDYLFGGPDENISPESVVSAGGSVIISPSGTVLAGPNFEGEALITADLDFGEIVRAKLDFDVVGHYARPDVLKLTVNDHPLNPVTFSSGTAALEKKDSENV

SNPs (tot: 10)

Position	A %	C %	G %	T %	Probability
1699	25	75			0.996473
1792	87		12		0.992554
1793	87		12		0.992554
1794			12	87	0.992554
1799			87	12	0.992554
1807			12	87	0.992554
1825	12		87		0.992554
1890	16			83	0.994512
1891	16			83	0.994512
1894	75			25	0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain