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UniGene Name: sp_v1.1_unigene4994
Length: 231 nt
Origin of reads:
 UniGene Fasta
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| >sp_v1.1_unigene4994
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Ace file of the UniGene sp_v1.1_unigene4994
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If you push the Download ace button, you will download an ace file of this UniGene.
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Go to the Tablet ACE viewer Web
| Annotations |
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| Source | Descriptions | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| AutoFact | PREDICTED: similar to Alpha platelet-derived growth factor receptor precursor (PDGF-R-alpha) (CD140a antigen), partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI000155C0C9 | - | - | 3.0e-21 | 93% |
| Blast2go | alpha-type platelet-derived growth factor receptor precursor | - | - | 6.52541e-21 | 95% |
| Source | GOs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Blast2go | protein phosphorylation | GO:0006468 | Biological Process | 6.52541e-21 | 95% |
| Blast2go | palate development | GO:0060021 | Biological Process | 6.52541e-21 | 95% |
| Blast2go | adrenal gland development | GO:0030325 | Biological Process | 6.52541e-21 | 95% |
| Blast2go | extracellular matrix organization | GO:0030198 | Biological Process | 6.52541e-21 | 95% |
| Blast2go | estrogen metabolic process | GO:0008210 | Biological Process | 6.52541e-21 | 95% |
| Blast2go | face morphogenesis | GO:0060325 | Biological Process | 6.52541e-21 | 95% |
| Blast2go | odontogenesis of dentin-containing tooth | GO:0042475 | Biological Process | 6.52541e-21 | 95% |
| Blast2go | response to hyperoxia | GO:0055093 | Biological Process | 6.52541e-21 | 95% |
| Blast2go | gliogenesis | GO:0042063 | Biological Process | 6.52541e-21 | 95% |
| Blast2go | response to cytokine stimulus | GO:0034097 | Biological Process | 6.52541e-21 | 95% |
| Blast2go | wound healing | GO:0042060 | Biological Process | 6.52541e-21 | 95% |
| Blast2go | positive regulation of cell proliferation | GO:0008284 | Biological Process | 6.52541e-21 | 95% |
| Blast2go | inner ear development | GO:0048839 | Biological Process | 6.52541e-21 | 95% |
| Blast2go | response to inorganic substance | GO:0010035 | Biological Process | 6.52541e-21 | 95% |
| Blast2go | luteinization | GO:0001553 | Biological Process | 6.52541e-21 | 95% |
| Blast2go | platelet-derived growth factor receptor signaling pathway | GO:0048008 | Biological Process | 6.52541e-21 | 95% |
| Blast2go | male genitalia development | GO:0030539 | Biological Process | 6.52541e-21 | 95% |
| Blast2go | skeletal system morphogenesis | GO:0048705 | Biological Process | 6.52541e-21 | 95% |
| Blast2go | Leydig cell differentiation | GO:0033327 | Biological Process | 6.52541e-21 | 95% |
| Blast2go | response to estradiol stimulus | GO:0032355 | Biological Process | 6.52541e-21 | 95% |
| Blast2go | in utero embryonic development | GO:0001701 | Biological Process | 6.52541e-21 | 95% |
| Blast2go | platelet-derived growth factor alpha-receptor activity | GO:0005018 | Molecular Function | 6.52541e-21 | 95% |
| Blast2go | platelet-derived growth factor binding | GO:0048407 | Molecular Function | 6.52541e-21 | 95% |
| Blast2go | protein dimerization activity | GO:0046983 | Molecular Function | 6.52541e-21 | 95% |
| Blast2go | membrane | GO:0016020 | Cellular Component | 6.52541e-21 | 95% |
| Full-Lengther Next Prediction |
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Fln status: unknown
Fln database: testcode
Fln msg: Non coding ORF found >= 200 nt
Test code: 0
Test Code was used to find complete genes when there was not found a reliable orthologue. The best ORF (Open Reading Frame) is shown, and only ORFs > 200pb were analyzed. Your ORF will be more reliable if a stop codon was found before the start codon. A Test Code value > 0.95 means the ORF is probably coding. A Test Code value < 0.74 means the ORF is probably non-coding. Test Code values in between 0.74 and 0.95 mean it is uncertain whether the ORF is coding or not.
| SNPs (tot: 2) |
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| Position | A % | C % | G % | T % | Probability |
|---|---|---|---|---|---|
| 156 | 20 | 80 | 0.995493 | ||
| 168 | 20 | 80 | 0.995493 |
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain
