SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene4833

Length: 2485 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

>sp_v1.1_unigene4833
CTATTCCTTCTAGATGGAAGGGGAAATGCGTGGAAGGAGATGATTTCAATTCATCTAACTGTAACAGAAAGCTGATTGGTGCCCGTTACTATGGTGATGGATTCTCTATGTCTATGGGTACTGAAGCGAATTTCCCCATCTATGATGGCCCAAGTACTACTGACCTAAACGATCTTCCAAGGCCAATTAGGACTTATGGGTCTGCAAGGGACTCCCTGGGGCATGGAAGTCACACCTCTACAACTGCGGGAGGAAGATTAGTAGAGAATGCAAGTTATTATGGGTTGGCAAAGGGAGTAGCCAGGGGAGGAGCTCCTCTTTCGAGGATTGCAGCCTATAAGGTCTGCTCTGAGGATGGATGCTCGGATGCTGCTATACTTGCGGCCTTTGACGATGCCATTAAGGATGGCGTCGATGTATTATCTCTTTCTCTCGGTGCTCCTTCATACTTTACACCAAATCTATTGACAGATGGTATAGCCATCGGCGCATTTCATGCGGTGCAGAATAATATTGTGGTTGTTTGCTCTGCTGGTAATGATGGGCCTTATTCCCACACAGTAGTCAATAGTGCGCCATGGATCTTGACGGTGGCAGCAAGCACTGTTGACAGGGTTTTTGATTCCAAAGTTGTTTTAGGAAACAACAAAACATTTGATGGACAAGCACTAAACTATTTCAATCTCAGCAACAGCTCTTATCCCATTGTTTTTGGTGGAGACATTGCAGCAGATGGAGTCTCTAACAGCTCAGCAGGGCGCTGCATAAGTGATTCTCTCAATAAAACGGGAGCAAATGGGAAAATTGTGCTATGTCTTCAGGCTGAAGCTGATGAAAGCAGAAACAGCAAGAGCTCCTTTATTCAAAGTGTAGGCGGGGTGGGAATGATAATAGTCGATGACACAAACAAGTACATGCCTTCAATCTACGACCTGCCTGCAACTCAAGTTTCACAGGCTTCCGGCATGGAGATCCTTGACTACATAAGATCTACCACTGAGGTCACTGCAACCATTCTTCCAGCAGAGACCGTGGTAGGGTTGAAGCCATCGCCAGTCGTTGCCAAATTTTCAGCTCGTGGTCCCAGTAAACTAACTGAAAACATTCTCAAGCCGGACATTACTGCTCCCGGAGTCAACATATTGGCCGGATGGACCCAGGAGAACCCGTACAGTGATCCCCCTCCAGGCGAATCGCCCAGTCCCTATGCTATAATCTCAGGGACATCCATGGCCTGTCCACATGTCAGCGGAACTGCAGCCTTGTTGAGATCTGTCAACCCTGAATGGAGCGCCTCGGCAATCAAATCTGCTCTCATGACTACAGCAACCACAATGGACAATGCGAACGCTCATATAACAAATGACACGGGCTCTTCAACCACAGCATTTGACTTGGGAACCGGGGAGCTAAATCCCGTGAAGGCTCTGGACCCCGGGCTGGTCTATGAAAGCGACCCAAAGGACCATTTTCTGTTCCTCTGCTATTTTGGTTACAATCAAACCCAGATCGGCAGCATAACTGGGAACAAATCCTTTGTCTGTCCCCTGGATTCGAACCCGGAACTCATCAGCAACCTCAACTATCCATCCATTGCCATATCCAAATTGAACGGTACCAGGTCTGTAGTTCGAACATTGATGAACGTGGGTCCCGTTGATTCAATATACACAGCCACCGTGATGCCCCCTCCAGGGGTGGATGTGAAAGTATCTCCTGAGAAATTGGTGTTCTCAGCATCTCAGAAAAGTATTAGCATCAATGTCCAACTGAAGGTCACGGCTACTCCCTCTGTGAAGGACTATGTGTTTGGCAGCCTGAGTTTCTCTGATGGCACTCGTTCTCTCGTTACACCTCTCGTTGTGAATCCCGTTTCTGTTTAACGATCTCCATTCAATGCAGAGGTATTTCTAATAAAATTCCATGGAGACCCGTTGCAGGCTTTATGGTCATGTTCTGATCTCAAGGATCTTCATATATATGCGGTGTTGATGATATTCACATACGTGTTACAAAGTCGACGAGTTTTACATGTAATTACCAATAATCTCCCAACAAATTCCCGACTCCAAAACGAAACTGCAGGCAAGTGCAAATGTCACAGGGGAAACTTCAAAATATTTCGTGTGATTATATTAATCCAACATTGAACTGTCAATAGCAGCAACAATCTGTTTATAATAATGTTTCATGGCATTATTGTATCTGAGAGAAGTTCAAAAATAGCAGCAATACCATGTTTCATTGTATTGTTGTATGGAGAGAAGTTCAAAAACAGCAGCAATGCCATGTTTCATTGTATTGTTGTATGGAGAGAAGTTCAAAAACAGCAGCGATGCCATGCTATTATTGTATTGAGAGAAGGTATGGAAATAATTATGCATTTTACAATTGAGTGAGAAGTTCAAAAATATTAAAATTGAGAGAATTATGTATTTTACAATTCACTGTAAGTTCCAAAAATAACATCAATGCCATGATATTA

Ace file of the UniGene sp_v1.1_unigene4833 (antisense)

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Xylem serine proteinase 1, putative n=1 Tax=Ricinus communis RepID=B9SHW1_RICCO	-	-	45%
FL-Next	tr=Subtilisin-like protein; Picea abies (Norway spruce) (Picea excelsa).	-	-	46%
Blast2go	xylem serine proteinase 1	-	-	63%

Source	GOs	Term	Type	e value	Identity
Blast2go	catalytic activity	GO:0003824	Molecular Function	0.0	63%
Blast2go	apoplast	GO:0048046	Cellular Component	0.0	63%

Source	InterPros	Term	Type	Identity
Blast2go	Peptidase S8/S53, subtilisin/kexin/sedolisin	IPR000209	-	63%
Blast2go	Protease-associated domain, PA	IPR003137	-	63%
Blast2go	Peptidase S8, subtilisin-related	IPR015500	-	63%
Blast2go	Peptidase S8, subtilisin, Ser-active site	IPR023828	-	63%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: Q40764

Fln msg: your sequence is shorter than subject: 627 - 779

Fln protein: IPSRWKGKCVEGDDFNSSNCNRKLIGARYYGDGFSMSMGTEANFPIYDGPSTTDLNDLPRPIRTYGSARDSLGHGSHTSTTAGGRLVENASYYGLAKGVARGGAPLSRIAAYKVCSEDGCSDAAILAAFDDAIKDGVDVLSLSLGAPSYFTPNLLTDGIAIGAFHAVQNNIVVVCSAGNDGPYSHTVVNSAPWILTVAASTVDRVFDSKVVLGNNKTFDGQALNYFNLSNSSYPIVFGGDIAADGVSNSSAGRCISDSLNKTGANGKIVLCLQAEADESRNSKSSFIQSVGGVGMIIVDDTNKYMPSIYDLPATQVSQASGMEILDYIRSTTEVTATILPAETVVGLKPSPVVAKFSARGPSKLTENILKPDITAPGVNILAGWTQENPYSDPPPGESPSPYAIISGTSMACPHVSGTAALLRSVNPEWSASAIKSALMTTATTMDNANAHITNDTGSSTTAFDLGTGELNPVKALDPGLVYESDPKDHFLFLCYFGYNQTQIGSITGNKSFVCPLDSNPELISNLNYPSIAISKLNGTRSVVRTLMNVGPVDSIYTATVMPPPGVDVKVSPEKLVFSASQKSISINVQLKVTATPSVKDYVFGSLSFSDGTRSLVTPLVVNPVSV*

Protein Length: 628

Fln nts: CTATTCCTTCTAGATGGAAGGGGAAATGCGTGGAAGGAGATGATTTCAATTCATCTAACTGTAACAGAAAGCTGATTGGTGCCCGTTACTATGGTGATGGATTCTCTATGTCTATGGGTACTGAAGCGAATTTCCCCATCTATGATGGCCCAAGTACTACTGACCTAAACGATCTTCCAAGGCCAATTAGGACTTATGGGTCTGCAAGGGACTCCCTGGGGCATGGAAGTCACACCTCTACAACTGCGGGAGGAAGATTAGTAGAGAATGCAAGTTATTATGGGTTGGCAAAGGGAGTAGCCAGGGGAGGAGCTCCTCTTTCGAGGATTGCAGCCTATAAGGTCTGCTCTGAGGATGGATGCTCGGATGCTGCTATACTTGCGGCCTTTGACGATGCCATTAAGGATGGCGTCGATGTATTATCTCTTTCTCTCGGTGCTCCTTCATACTTTACACCAAATCTATTGACAGATGGTATAGCCATCGGCGCATTTCATGCGGTGCAGAATAATATTGTGGTTGTTTGCTCTGCTGGTAATGATGGGCCTTATTCCCACACAGTAGTCAATAGTGCGCCATGGATCTTGACGGTGGCAGCAAGCACTGTTGACAGGGTTTTTGATTCCAAAGTTGTTTTAGGAAACAACAAAACATTTGATGGACAAGCACTAAACTATTTCAATCTCAGCAACAGCTCTTATCCCATTGTTTTTGGTGGAGACATTGCAGCAGATGGAGTCTCTAACAGCTCAGCAGGGCGCTGCATAAGTGATTCTCTCAATAAAACGGGAGCAAATGGGAAAATTGTGCTATGTCTTCAGGCTGAAGCTGATGAAAGCAGAAACAGCAAGAGCTCCTTTATTCAAAGTGTAGGCGGGGTGGGAATGATAATAGTCGATGACACAAACAAGTACATGCCTTCAATCTACGACCTGCCTGCAACTCAAGTTTCACAGGCTTCCGGCATGGAGATCCTTGACTACATAAGATCTACCACTGAGGTCACTGCAACCATTCTTCCAGCAGAGACCGTGGTAGGGTTGAAGCCATCGCCAGTCGTTGCCAAATTTTCAGCTCGTGGTCCCAGTAAACTAACTGAAAACATTCTCAAGCCGGACATTACTGCTCCCGGAGTCAACATATTGGCCGGATGGACCCAGGAGAACCCGTACAGTGATCCCCCTCCAGGCGAATCGCCCAGTCCCTATGCTATAATCTCAGGGACATCCATGGCCTGTCCACATGTCAGCGGAACTGCAGCCTTGTTGAGATCTGTCAACCCTGAATGGAGCGCCTCGGCAATCAAATCTGCTCTCATGACTACAGCAACCACAATGGACAATGCGAACGCTCATATAACAAATGACACGGGCTCTTCAACCACAGCATTTGACTTGGGAACCGGGGAGCTAAATCCCGTGAAGGCTCTGGACCCCGGGCTGGTCTATGAAAGCGACCCAAAGGACCATTTTCTGTTCCTCTGCTATTTTGGTTACAATCAAACCCAGATCGGCAGCATAACTGGGAACAAATCCTTTGTCTGTCCCCTGGATTCGAACCCGGAACTCATCAGCAACCTCAACTATCCATCCATTGCCATATCCAAATTGAACGGTACCAGGTCTGTAGTTCGAACATTGATGAACGTGGGTCCCGTTGATTCAATATACACAGCCACCGTGATGCCCCCTCCAGGGGTGGATGTGAAAGTATCTCCTGAGAAATTGGTGTTCTCAGCATCTCAGAAAAGTATTAGCATCAATGTCCAACTGAAGGTCACGGCTACTCCCTCTGTGAAGGACTATGTGTTTGGCAGCCTGAGTTTCTCTGATGGCACTCGTTCTCTCGTTACACCTCTCGTTGTGAATCCCGTTTCTGTTTAA___CGATCTCCATTCAATGCAGAGGTATTTCTAATAAAATTCCATGGAGACCCGTTGCAGGCTTTATGGTCATGTTCTGATCTCAAGGATCTTCATATATATGCGGTGTTGATGATATTCACATACGTGTTACAAAGTCGACGAGTTTTACATGTAATTACCAATAATCTCCCAACAAATTCCCGACTCCAAAACGAAACTGCAGGCAAGTGCAAATGTCACAGGGGAAACTTCAAAATATTTCGTGTGATTATATTAATCCAACATTGAACTGTCAATAGCAGCAACAATCTGTTTATAATAATGTTTCATGGCATTATTGTATCTGAGAGAAGTTCAAAAATAGCAGCAATACCATGTTTCATTGTATTGTTGTATGGAGAGAAGTTCAAAAACAGCAGCAATGCCATGTTTCATTGTATTGTTGTATGGAGAGAAGTTCAAAAACAGCAGCGATGCCATGCTATTATTGTATTGAGAGAAGGTATGGAAATAATTATGCATTTTACAATTGAGTGAGAAGTTCAAAAATATTAAAATTGAGAGAATTATGTATTTTACAATTCACTGTAAGTTCCAAAAATAACATCAATGCCATGATATTA

Fln Alignment:

sp_v1.1_unigene4833___IPSRWKGKCVEGDDFNSSNCNRKLIGARYYGDGFSMSMGTEANFPIYDGPSTTDLNDLPRPIRTYG-SARDSLXXXXXXXXXXXGRLVENASYYGLAKGVARGGAPLS--RIAAYKVCSED-GCSXXXXXXXXXXXXXDGVDVLSLSLGAPSYFTPNLLTDGIAIGAFHAVQNNIVVVCSAGNDGPYSHTVVNSAPWILTVAASTVDRVFDSKVVLGNNKTFDGQALNYFNLSNSS-YPIVFGGDIAADGVSNSSAGRCISDSLNKTGANGKIVLCLQAEADESRNSKSSFIQSVGGVGMIIVDDTNKYMPSIY-DLPATQVSQASGMEILDYIRSTTEVTATILPAETVVGLKPSPVVAKFSARGPSKLTENILKPDITAPGVNILAGWTQENPYSDPP--PGESPSPYAIISGTSMACPHVSGTAALLRSVNPEWSASAIKSXXXXXXXXXXXXXAHITNDTGSSTTAFDLGTGELNPVKALDPGLVYESDPKDHFLFLCYFGYNQTQIGSITGNKSFVCPLDSNPELISNLNYPSIAISKL---NGTRSVVRTLMNVGPVDS-IYTATVMPPPGVDVKVSPEKLVFSASQKSISINVQLKVTATPSVKDYVFGSLSFSDGTRSLVTPLVVNPV
Q40764______________VPSRWKGACVKGENFNVSNCNRKIIGARYYSGGEDDDLKK---------------NSKPKSIWPESRTARDYQGHGTYTAATAAGSFVDNANYNGLANGTARGGSASSSTRIAMYRVCGLDYGCPGVQILAAFDDAVKDGVDIVSISIGVRSSNQADFVKDAIAIGAFHATQKGILVVSSAGNEGPDSQTVVNAAPWIFTVGATSIDREFLSNVVLGNGKIIKGKGITMSNLSHSAVHPLVYAGSIPDKSSYPVAASNCLLDSLDASKAKGNVVVCIANDTAASRYIMKLAVQDAGGIGMVVVEDIQIFEAFDYGTFPATAVSKTSATEIFSYIKSNRNPVATITLTEVVTNYIPAPVIASFSSRGPGGLTQNILKPDISAPGVNIIAAWNPPNQSDEDTVVSEMTPSTFNMMSGTSVAVPHVTGAAAFVKSINPTWSSSAIRSALMTTAIVRNNMGKLLTNESDIPGTPFDFGAGVVNPIGALQPGLVYETSIDDYFHFLCNYGLDSENIKIIAANESYKCPSGVNADLISNMNYPSIAISKLGIKNGSTTISRSVTNFVPEQAPTYKVTIDAPPGLNVKVSPEILHFSKTSKKLSFNVVFTPT-NVATKGYAFGTLVWSDGKHNVRSPFAVNMV

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain