SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene4619

Length: 638 nt

Origin of reads: Biogeco_1 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene4619

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	SR1; SR1; RNA binding / nucleic acid binding / nucleotide binding; K12890 splicing factor, arginine/serine-rich 1/9	-	-	3.0e-38	73%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	93%
Blast2go	protein	-	-	5.83921e-42	89%

Source	GOs	Term	Type	e value	Identity
Blast2go	response to biotic stimulus	GO:0009607	Biological Process	5.83921e-42	89%
Blast2go	calmodulin binding	GO:0005516	Molecular Function	5.83921e-42	89%
Blast2go	interchromatin granule	GO:0035061	Cellular Component	5.83921e-42	89%
Blast2go	nuclear speck	GO:0016607	Cellular Component	5.83921e-42	89%

Source	InterPros	Term	Type	e value	Identity
Blast2go	RNA recognition motif domain	IPR000504	-	5.83921e-42	89%
Blast2go	Nucleotide-binding, alpha-beta plait	IPR012677	-	5.83921e-42	89%

Full-Lengther Next Prediction

SSRs (tot: 1)

Start position	End position	Sequence	Length
626	637	TGG TGG TGG TGG	12

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain