SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene4451

Length: 1304 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene4451

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Unassigned protein	-	-	-
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	91%
Blast2go	unknown [Picea sitchensis]	-	-	96%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9NXB0

Fln msg:

Fln protein: MDSSSSPPDIKTTATSNNGPTEASRKMGFVENAMRGVRSLSHTLKRHENYVIHLVLVGAFVSLSMRSLDRQHQIDALEAERVSLEQENKGLKKRIWNLKQGMLEEAAKQDDRNLIVRLKALFGDSIVEENKPDSTGPKPKFVV*

Protein Length: 145

Fln nts: CGTCGTGACCTTGGCTGTCACTCAATTTTTGGTGGTACACATCTATGTGATCTTCATCGCAACTGACAATTTGGTTCCACATTAACAGACTCTTCCTCCATTGTCCATAGCCCGTTCTTCAAGATCTCTGG_-_ATGGATTCGTCCTCGTCCCCTCCCGACATTAAGACCACGGCCACGTCCAACAATGGCCCCACTGAAGCTAGCAGGAAGATGGGCTTCGTTGAAAATGCCATGAGGGGAGTGCGCTCTCTGAGCCATACCCTAAAGAGACACGAAAACTACGTAATCCATTTGGTTCTGGTGGGCGCCTTTGTTTCCCTCAGTATGAGGTCTCTGGATCGCCAGCATCAGATTGACGCCCTTGAAGCGGAGAGGGTTTCTTTAGAACAGGAAAACAAAGGCCTCAAGAAGAGGATATGGAATTTGAAACAGGGGATGCTTGAAGAGGCTGCGAAGCAGGACGATCGTAATCTCATCGTCAGACTCAAAGCTCTCTTCGGTGACAGTATTGTGGAAGAAAACAAGCCAGATTCAACTGGACCAAAGCCAAAATTTGTGGTATGA___ATTTGCATACTTGCCAAAAGTTATCAGTGGGATCATCAGTTGTTATTTTACATTGGGATTTTTCAGAGTAGTAAACAGCAAATTGAAGCGAACTCTTTGTACCCATTTCTTATGTGGTGGTAGTGATTTATGCCTCTAAAATATGTTTGGCAGTTCTATGGCTCTGATGATGGGCTTAAGACGTTATCTGTTTAACATTTTTTATTTATTTTTACGAAGTATAGATATTAGAAATAAGTAGTCAATAGAGTGGACGAGTGTAAGTCTTACAGGACATTGAAGAAATGTCATAGTCCCATGTATTTGAGAACATGAGGAATTAATCTCTGACCTGATCCTTCCATGGGCAGAGTCTTTTGTATCTTAGGAGATCATTCCAGTCACAGTGTTATCTTTTGCAGCTGTTTCTCATTTCTGCAGTGCCTGATTTGATTATCGAACATAACATGGGAGTCTCTGAATCAGTATCAAATCAGAGAGATTAGGTCTGTTGTAAAGGCAATCTCAATCAAGACGAATGCCATTTTAGGCTGAATTTAGAATTTTGATGAGTTTTGTGGTGACAAGTTTGGTGGCACTTTTTACTGCTGCTGAAGAGGACCTGACAAATTGGGCAAGTGCATATTATCTGTCAAGTTGAAATGTGTTTTCTTTGATTAACAGTTTCTTAAAATTTTGTTATATTGAGGTTCTAGTTGTTAAAGAGCTTTATAATAAATGGTACTAGTTCTTGAAGTTTCT

Fln Alignment:

sp_v1.1_unigene4451___MDSSSSPPDIKTTATSNNGPTEASRKMGFVENAMRGVRSLSHTLKRHENYVIHLVLVGAFVSLSMRSLDRQHQIDALEAERVSLEQENKGLKKRIWNLKQGMLEEAAKQDDRNLIVRLKALFGDSIVEENKPDSTGPKPKFVV
A9NXB0______________MGSSSSPTDIKTTPTSNNGPTEANKKMGIVENAMRGVRSLSNTLKRHENYVIHLVLVGAFVSLSMRSLDRQHQIEALEAERVSLEQENKGLKKRIWNLKQGMLEEAANQDDRNLILRLKALFGDSIVQENKPDSSGPKPKFVV

SNPs (tot: 2)

Position	A %	C %	G %	T %	Probability
373			87	12	0.992554
1008	94		5		0.998744

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain