SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene4239

Length: 837 nt

Origin of reads: Biogeco_1 Uagpf

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene4239

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	NADH-ubiquinone oxidoreductase chain 3 n=24 Tax=Spermatophyta RepID=NU3M_ARATH	-	-	84%
FL-Next	sp=NADH-ubiquinone oxidoreductase chain 3; Pinus sylvestris (Scots pine). Mitochondrion.	-	-	97%
Blast2go	nadh dehydrogenase subunit 3	-	-	96%

Source	GOs	Term	Type	e value	Identity
Blast2go	membrane part	GO:0044425	Cellular Component	0.0	96%
Blast2go	mitochondrion	GO:0005739	Cellular Component	0.0	96%

Full-Lengther Next Prediction

SNPs (tot: 33)

Position	A %	C %	G %	T %	Probability
42	16		83		0.994512
44		83	16		0.994512
45	85		14		0.993533
91		85		14	0.993533
96		85	14		0.993533
97		85		14	0.993533
114		66		33	1.0
115		50		50	1.0
133		60		40	1.0
144	16	83			0.994512
146	80	20			0.995493
231	40		60		1.0
338		44		55	1.0
355		15		84	0.999986
395		33		66	1.0
477		12		87	0.999964
478			12	87	0.999964
479		81		18	1.0
482		12		87	0.999964
483	87	12			0.999964
485	87			12	0.999964
486		87	12		0.999964
488	87	12			0.999964
490			12	87	0.999964
492		12		87	0.999964
496		12		87	0.999964
545		62		37	1.0
588		11		88	0.923564
686	80		20		0.995493
687		80	20		0.995493
688	80			20	0.995493
689	80	20			0.995493
691			25	75	0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain