SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene4135

Length: 616 nt

Origin of reads: Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene4135

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	WCRKC2; WCRKC2 (WCRKC THIOREDOXIN 2)	-	-	6.0e-40	62%
FL-Next	sp=Thioredoxin-like 3-2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	62%
Blast2go	protein	-	-	3.18375e-42	77%

Source	GOs	Term	Type	e value	Identity
Blast2go	chloroplast stroma	GO:0009570	Cellular Component	3.18375e-42	77%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Thioredoxin	IPR005746	-	3.18375e-42	77%
Blast2go	Thioredoxin fold	IPR012335	-	3.18375e-42	77%
Blast2go	Thioredoxin-like fold	IPR012336	-	3.18375e-42	77%
Blast2go	Thioredoxin domain	IPR013766	-	3.18375e-42	77%
Blast2go	Thioredoxin-like	IPR017936	-	3.18375e-42	77%

Full-Lengther Next Prediction

SNPs (tot: 7)

Position	A %	C %	G %	T %	Probability
138	25		75		0.996473
221	20			80	0.995493
259	20		80		0.995493
434	14			85	0.993533
435		85		14	0.993533
436	85		14		0.993533
438		85	14		0.993533

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain