SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene4075

Length: 807 nt

Origin of reads: Biogeco_1 Uagpf Uma

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v1.1_unigene4075 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	leucine-rich repeat-containing protein, putative (EC:3.1.3.16)	-	-	1.99993e-41	47%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	58%
Blast2go	leucine-rich repeat-containing	-	-	1.54143e-44	69%

Full-Lengther Next Prediction

SNPs (tot: 70)

Position	A %	C %	G %	T %	Probability
408	88			11	0.923564
410	11	88			0.923564
411	88		11		0.923564
412	88			11	0.923564
413	88		11		0.923564
415	11			88	0.923564
417	22	11		66	0.999999
418		77	22		0.999999
419	11			88	0.923564
420	66		11		0.999999
421		66	33		1.0
422	22	66		11	0.999999
425		77	22		0.999999
426		88	11		0.923564
427	11			66	0.999999
429	22		11	66	0.999999
430	25			75	1.0
431			25	75	1.0
432			25	75	1.0
436		18		81	0.999994
440		20		80	0.999996
441			20	80	0.999996
473		87	12		0.992554
506		90	10		0.90298
580		87	12		0.992554
581		12		87	0.992554
582	75	12		12	0.975346
584			75	25	1.0
586		85		14	0.993533
587	85		14		0.993533
590	85		14		0.993533
591	85			14	0.993533
595		14		85	0.993533
596	14		85		0.993533
598		14		85	0.993533
602	85		14		0.993533
607		85	14		0.993533
609	85	14			0.993533
610			14	85	0.993533
644			66	33	1.0
645		66	33		1.0
646	33			66	1.0
651	33		66		1.0
654			33	66	1.0
655		33		66	1.0
660	66		33		1.0
662		33		66	1.0
663	33		16	50	1.0
664	16	83			0.994512
667	50	33		16	1.0
671		25		75	0.996473
672	25			75	0.996473
673			25	75	0.996473
674		25	75		0.996473
678			25	75	0.996473
679			25	75	0.996473
681		25	75		0.996473
682	25	75			0.996473
684	75		25		0.996473
687	75	25			0.996473
704		33		66	0.997452
705		33	66		0.997452
706	66			33	0.997452
707		66		33	0.997452
714	66			33	0.997452
715			66	33	0.997452
717	33			66	0.997452
718	33	66			0.997452
721		66	33		0.997452
725	33		66		0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain