SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene3943

Length: 1574 nt

Origin of reads: Biogeco_1 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene3943

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	taz protein, putative; K13511 monolysocardiolipin acyltransferase [EC:2.3.1.-]	-	-	63%
FL-Next	tr=Taz protein, putative; Ricinus communis (Castor bean).	-	-	63%
Blast2go	phospholipid glycerol acyltransferase family protein	-	-	69%

Source	ECs	Term	Type	e value	Identity
AutoFact	Transferases, Acyltransferases, Transferring groups other than amino-acyl groups.	EC:2.3.1.-	-	0.0	63%

Source	KEGGs	Term	Identity
AutoFact	Fatty acid biosynthesis	00061	63%
AutoFact	Tetracycline biosynthesis	00253	63%
AutoFact	Lysine degradation	00310	63%
AutoFact	Arginine and proline metabolism	00330	63%
AutoFact	Histidine metabolism	00340	63%
AutoFact	Tyrosine metabolism	00350	63%
AutoFact	Benzoate degradation	00362	63%
AutoFact	Lipopolysaccharide biosynthesis	00540	63%
AutoFact	Glycerophospholipid metabolism	00564	63%
AutoFact	Ether lipid metabolism	00565	63%
AutoFact	Glycosphingolipid biosynthesis - ganglio series	00604	63%
AutoFact	Toluene degradation	00623	63%
AutoFact	Naphthalene degradation	00626	63%
AutoFact	Aminobenzoate degradation	00627	63%
AutoFact	Ethylbenzene degradation	00642	63%
AutoFact	Butanoate metabolism	00650	63%
AutoFact	Methane metabolism	00680	63%
AutoFact	Limonene and pinene degradation	00903	63%
AutoFact	Diterpenoid biosynthesis	00904	63%
AutoFact	Carotenoid biosynthesis	00906	63%
AutoFact	Anthocyanin biosynthesis	00942	63%
AutoFact	Stilbenoid, diarylheptanoid and gingerol biosynthesis	00945	63%
AutoFact	Isoquinoline alkaloid biosynthesis	00950	63%
AutoFact	Tropane, piperidine and pyridine alkaloid biosynthesis	00960	63%
AutoFact	Betalain biosynthesis	00965	63%
AutoFact	Biosynthesis of unsaturated fatty acids	01040	63%
AutoFact	Biosynthesis of type II polyketide backbone	01056	63%
AutoFact	Biosynthesis of terpenoids and steroids	01062	63%
AutoFact	Metabolic pathways	01100	63%
AutoFact	Biosynthesis of secondary metabolites	01110	63%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: tr_plants

Fln subject: B9SRC1

Fln msg:

Fln protein: MGSNTMEWAARATHLGGIPRRMVISTVGAFAKLITSYLNYTQVHNAGTLLHLIKSRPPGTPLITVSNHMSTLDDPLMWGFKGSPITNWKQARWTLTAEDICFTNPFFTYFFRLGKCIPITRGAGIYQTHMNEALDLINKGEWLHTFPEGKVSQDGGPIRRLKWGTASLIVRASVTPIVLPIVHSGFEQVMPEKHWFGRRPLLPLCLKNINIVVGEPMEFDISTLQQRAESVSRVLRASGDEYHEGNKGHLDISGWPTGLCKGLDEIAQKWLFIHISDHIRNAMQKLCAKSQVS*

Protein Length: 295

Fln nts: ATGGGGAAGCTCTGATGGGCGTGAAAGGCCATGTTATTACTCGTGTCGCAGTCCAATGCCCCTATCCCACGCACTCGGTAAATCTGGTAAATCTGAGCGGTATATTCATTCTCATTCATAACGATGCAAATGaATAGACGTTTTTCAGCAAGGCCTGCCCCAGCGCCCGTTCACGCCTCTGTATGTGTATATTGAGGTTATACCCAAAAATTCCAAGACCACTCGCTCTAAGGAAGAAAACACCAATGCCGCTAGTTTGCAAGTTTCACAGGTCAAATTAAACCTGAAACTCTATTTTATAGTATTAACAGAGGGAAACTATCTATACCCACTATTGAAATCGGGATACAAACATATATCACTGCAATAAGCAACTATGATATTTGGCAGAATGGCTTGATGAACAGAGGGGAGG_-_ATGGGGAGCAATACAATGGAGTGGGCTGCAAGAGCGACCCATCTGGGGGGTATCCCTCGCAGAATGGTGATTAGCACAGTTGGGGCCTTCGCTAAGCTCATCACCTCCTATCTCAATTATACCCAAGTCCACAATGCAGGCACTTTGCTCCACCTCATCAAATCCAGGCCTCCTGGCACGCCTCTCATCACAGTCAGCAATCATATGTCCACGTTGGATGATCCACTTATGTGGGGGTTTAAGGGTTCTCCTATTACGAACTGGAAGCAAGCTCGTTGGACTCTCACAGCAGAGGACATTTGTTTCACAAATCCTTTCTTTACATACTTCTTTCGACTTGGCAAATGCATCCCTATTACAAGGGGTGCTGGCATTTACCAGACACATATGAATGAGGCTCTTGATCTCATTAATAAAGGAGAATGGTTGCACACATTTCCTGAAGGCAAGGTATCACAAGATGGTGGGCCTATACGAAGGTTAAAGTGGGGAACTGCAAGCCTTATTGTGCGTGCTTCTGTTACACCAATTGTTCTTCCTATTGTACACAGTGGGTTTGAACAGGTAATGCCGGAGAAACACTGGTTCGGAAGAAGGCCACTTCTTCCTCTTTGTCTAAAAAACATTAATATTGTTGTCGGCGAACCTATGGAGTTTGATATTTCCACACTTCAGCAGAGAGCTGAGTCTGTGTCGAGAGTTCTTAGAGCATCCGGTGATGAATACCATGAAGGGAATAAGGGCCATCTCGACATCTCTGGATGGCCAACGGGTTTGTGTAAAGGATTAGATGAAATCGCGCAGAAATGGCTTTTCATACATATCTCGGATCACATTCGAAATGCCATGCAGAAGCTGTGCGCAAAAAGCCAGGTCTCTTAA___TAAACGACCATAAATAATTTACACCTCCTGTATCTGGGCAGGATTCAACACTGAGAATTGCAAGGTAATCCGATGCTTTTTTTTGTGAATGTCACAACCAATAAAATGTAGAAAGCGATCATATAGTAAGTAATAAAAACAATCGGTATATTTTATCATTTTGTTGATTCTTATTAATAAAATGATATTTTCTGGATTTTTGTTTTAGGACTGTTGCCAAATTTTATGTTATTTTTGCAACATTTCGTTAAGTTTCTGCTGTTTTCTGTCATTGAAA

Fln Alignment:

sp_v1.1_unigene3943___MEWAARATHLGGIPRRMVISTVGAFAKLITSYLNYTQVHNAGTLLHLIKSRPPGTPLITVSNHMSTLDDPLMWGFKGSPITNWKQARWTLTAEDICFTNPFFTYFFRLGKCIPITRGAGIYQTHMNEALDLINKGEWLHTFPEGKVSQDGGPIRRLKWGTASLIVRASVTPIVLPIVHSGFEQVMPEKHWFGRRPLLPLCLKNINIVVGEPMEFDISTLQQRAESVSRVLRASGDEYHEGNKGHLDISGWPTGLCKGLDEIAQKWLFIHISDHIRNAMQKL
B9SRC1______________MEWAGKGKHLGGIPRKMVFMAVGAFAKAVSNLLNTSSVHNADTLIHLVRSRPSGVPLITVSNHMSTLDDPVMWGFNGFPTCDSNLARWVLAAEDICFKNPVFSYFFRLGKCIPITRGAGIYQEHMNEALEHLSNGAWLHTFPEGKVCQEDAPIRRLKWGTASLIVRAPVTPIVLPIVHRGFEEVMPENYWFGRRPLFPLCNKMINIVVGEPIEFDLPRMRQMAISLS-------------HNFPVPAKGWPGIPHHGLDEAAQRCLYMAISEKIQRVMESL

SNPs (tot: 15)

Position	A %	C %	G %	T %	Probability
777	83	16			0.994512
779	66		16	16	0.988813
782			83	16	0.994512
785	16		83		0.994512
789		16	83		0.994512
790	16	83			0.994512
1049	87		12		0.992554
1051		12		87	0.992554
1052	87	12			0.992554
1056		12		87	0.992554
1061	12		87		0.992554
1062		12	87		0.992554
1063		87		12	0.992554
1064		12	87		0.992554
1146	71		28		1.0

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain