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Fln status: Putative Complete

Fln database: coniferopsida.fasta

Fln subject: A9NPC1

Fln msg: No stop codon before M and low homology subject, your sequence is longer than subject: 411 - 314

Fln protein: MGFMKQEQPERYLRLEHLLVRTYFDPREAYHESSKEKRRSQIAQALASEVTVVPPSRLMALIGQSLKWQQHQGLLPPGTQFDLFRGTAAVKADEEEMYPTTLAHTIKFGKQSHPECARFSPDGQYLVSCSVDGFIEVWDYISGKLKKDLQYQADDSFMMHDDAVLCVDFSRDSEMLASGSQDGKIKVWRIRTGQCLRRLERAHSQGVTSLSFSRDGSQLLSTSFDSTARIHGLKSGKALKEFRGHTSYVNDAIFTSDGGRVITASSDCTVKVWDVKTTDCIQTFKPPPPLKGGDVSVNSVHLFPKNSEHIVVCNKASSIYIMTLQGQVVKSFSSGKREGGDFVAACISPKGEWIYCVGEDRNIYCFSQQSGKLEHLMKAHDKDIIGVTPHPHRNLLVTYSEDSTMKIWKP*

Protein Length: 412

Fln nts: CGTCGTGACCTTGGCTGTCACTCAAATTTCGAGAATTAGACACTGCAAGAGCATTCTAAGGCAGACTCAAGCA_-_ATGGGTTTCATGAAGCAGGAGCAACCTGAGCGCTATCTACGCCTGGAACACCTTCTAGTTCGCACATACTTTGATCCTCGTGAGGCTTATCACGAGTCATCAAAAGAGAAGAGGCGGTCACAAATAGCTCAAGCTTTGGCATCCGAAGTAACTGTTGTGCCGCCTTCTCGATTAATGGCCTTGATTGGTCAATCTTTGAAGTGGCAGCAACATCAAGGATTACTCCCTCCAGGTACACAGTTTGACCTCTTCAGGGGCACTGCAGCAGTGAAGGCAGATGAGGAAGAAATGTATCCAACAACACTGGCACATACAATTAAATTTGGGAAACAAAGCCACCCAGAATGTGCTCGCTTCTCTCCAGATGGTCAATACCTTGTCTCTTGCTCAGTTGATGGATTCATAGAGGTCTGGGACTACATCAGTGGGAAGCTTAAGAAGGATCTTCAGTATCAAGCTGATGATTCCTTTATGATGCATGATGATGCTGTCCTATGTGTTGACTTCAGTCGAGATTCAGAGATGCTGGCTTCTGGTTCACAGGATGGGAAAATTAAGGTATGGCGTATACGAACAGGTCAGTGTTTAAGGCGTCTAGAGCGTGCACATTCTCAGGGTGTTACAAGCCTTTCATTCTCTCGTGATGGAAGTCAGCTTTTAAGCACATCATTTGACAGCACTGCAAGAATACATGGGCTCAAATCTGGCAAAGCATTAAAGGAATTTCGTGGTCATACATCTTATGTAAATGATGCAATATTCACAAGTGATGGGGGTCGCGTTATTACTGCTTCTAGTGATTGTACTGTAAAGGTTTGGGATGTGAAGACAACTGATTGTATTCAAACATTTAAACCTCCACCTCCTCTCAAGGGAGGTGATGTATCAGTGAATTCTGTCCACCTTTTTCCAAAGAACTCAGAGCACATTGTAGTCTGCAACAAGGCATCATCAATCTATATCATGACACTCCAAGGGCAGGTTGTCAAAAGTTTCTCATCTGGTAAAAGGGAAGGAGGAGATTTTGTTGCTGCATGCATTTCTCCAAAAGGAGAGTGGATCTATTGCGTTGGGGAAGACAGAAATATCTACTGCTTCAGTCAACAGTCTGGGAAGCTTGAACATCTTATGAAGGCACATGACAAGGACATAATTGGTGTAACACCTCATCCACATAGGAATTTGTTGGTAACATATAGTGAAGATAGCACAATGAAGATATGGAAACCCTAATATGGATTTTATACTGCTATTGGATTTGTATAGAAATAATAATTTTTTGAATTTTGATGGTAGCGTATGGTTGAAGGAAAACTTGGATATATCATGTACACATTTTTCTCCATAAAGGAATGTATTTATTTATTT

Fln Alignment:

sp_v1.1_unigene3752___PTTLAHTIKFGKQSHPECARFSPDGQYLVSCSVDGFIEVWDYISGKLKKDLQYQADDSFMMHDDAVLCVDFSRDSEMLASGSQDGKIKVWRIRTGQCLRRLERAHSQGVTSLSFSRDGSQLLSTSFDSTARIHGLKSGKALKEFRGHTSYVNDAIFTSDGGRVITASSDCTVKVWDVKTTDCIQTF--KPPPPLKGGDVSVNSVHLFPKNSEHIV-VCNKASSIYIMTLQGQVVKSFSSGKREGGDFVAACIS-----PKGEWIYCVGEDRNIYCFSQQSGKLEHLMKAHDKDIIGVTPHPHRNLLVT--YSEDSTMKIW
A9NPC1______________PYKLKHILT-GHKRAVSSVKFSADGKLLGSASADKSVRIWSAGDGSAKRELQ--------GHAEGVSDMAWSSDSHYVCSASDDKTLRIWDVHTGDCIKTL-KGHTNYVFCVNFNPQSNLIVSGSFDETVRIWDVRTGKCLKVLPAHSDPVTAVHFNRDGSLIVSSSYDGLCRIWDSATGHCLKTLIDDENPPVSFVNFSPNGKFILAGTLDNTLRLWNFATGKFLKTYTGHVNSKY-------------CISSTFSVTNGKYIVSGSEDNCVYLWDLQARNIVQKLEGHTDTVISVSCHPTENKIASGALENDKTLRIW