SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene3682

Length: 1180 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene3682

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	HAG907; histone acetyltransferase; K11303 histone acetyltransferase 1 [EC:2.3.1.48]	-	-	2.0e-16	37%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	89%
Blast2go	histone acetyltransferase hat b	-	-	2.19423e-39	60%

Source	ECs	Term	Type	e value	Identity
AutoFact	Histone acetyltransferase.	EC:2.3.1.48	-	2.0e-16	37%

Source	GOs	Term	Type	e value	Identity
Blast2go	H4 histone acetyltransferase activity	GO:0010485	Molecular Function	2.19423e-39	60%
Blast2go	nucleus	GO:0005634	Cellular Component	2.19423e-39	60%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Histone acetyltransferase HAT1, C-terminal	IPR013523	-	2.19423e-39	60%

Full-Lengther Next Prediction

SNPs (tot: 31)

Position	A %	C %	G %	T %	Probability
205	20		80		0.995493
209		80	20		0.995493
210	80		20		0.995493
306		12		87	0.992554
326			11	88	0.923564
418		10		90	0.90298
426	10		90		0.90298
432		90		10	0.90298
445		11		88	0.923564
450	11			88	0.923564
554	90		10		0.90298
628	63			36	1.0
652	83	16			0.999991
653	83		16		0.999991
654	83			16	0.999991
661	78		14	7	0.999974
1038	16	83			0.994512
1039	16		83		0.994512
1042	87		12		0.992554
1043	87		12		0.992554
1045	87		12		0.992554
1079	83			16	0.994512
1082		16		83	0.994512
1083	16			83	0.994512
1085	83			16	0.994512
1087	16		83		0.994512
1088		83	16		0.994512
1090	83		16		0.994512
1093		16		83	0.994512
1096			16	83	0.994512
1098		16		83	0.994512

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain