SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene3265

Length: 935 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene3265

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	CwfJ-like family protein	-	-	4.0e-37	40%
FL-Next	tr=Predicted protein; subsp. trichocarpa).	-	-	0.0	40%
Blast2go	protein	-	-	9.27436e-37	63%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Cwf19-like, C-terminal domain-1	IPR006768	-	9.27436e-37	63%

Full-Lengther Next Prediction

SNPs (tot: 35)

Position	A %	C %	G %	T %	Probability
148		25	75		0.996473
149	75	25			0.996473
150	25		75		0.996473
151			75	25	0.996473
153		25		75	0.996473
154	25		75		0.996473
156	75	25			0.996473
157		25		75	0.996473
158			75	25	0.996473
159		25	75		0.996473
187	75		25		0.996473
191	87			12	0.992554
192		87	12		0.992554
193			12	87	0.992554
292	88		11		0.923564
313	22		77		0.999999
379	33	66			0.997452
384	66		33		0.997452
385	66	33			0.997452
387			33	66	0.997452
394		20		80	0.995493
403		13		86	0.999973
406	86		13		0.999973
409	86	13			0.999973
410		13		86	0.999973
420	86			13	0.999973
421		13	86		0.999973
423	86	13			0.999973
424			86	13	0.999973
425		13	86		0.999973
426	13		86		0.999973
736	84	15			0.999986
764	21			71	1.0
771	75		25		1.0
787		66		33	1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain