SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene2952

Length: 1113 nt

Origin of reads: Biogeco_1 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene2952

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Adenosine 3'-phospho 5'-phosphosulfate transporter, putative	-	-	74%
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	77%
Blast2go	protein	-	-	86%

Source	InterPros	Term	Type	e value	Identity
Blast2go	UAA transporter	IPR013657	-	0.0	86%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: tr_plants

Fln subject: D7U7R3

Fln msg:

Fln protein: MGNDDQVITLLGITLTGRPKWQQLLLCSCGFFFGYLINGVCEEYVYNRLQFSYGWYFTFVQGFVYLVLIYLQGFRVKHIVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLKRKYPVHEYVSAVLLVVGLIIFTLADAQTSPNFNVLGVIMVSGALILDSFLGNLQEAIFKMNPATSQMEMLFCSTAVGLPLLIIPMVLTGELFRAWTSCSQHLYVYLVLIFEAMATFVGQLSVLCLIAIFGAAATAMVTTARKALTLFLSYIIFTKPLTEQHGTGLLLISMGIILKMVPLPDPQSIARSNPKSAQNIPQNEEEGKPLVSDSA*

Protein Length: 347

Fln nts: CCTTGTATTCTGGAAATACAAGGAAAA_-_ATGGGAAATGATGATCAGGTCATCACATTGCTCGGCATAACGCTCACTGGAAGGCCTAAATGGCAGCAGCTTTTGCTGTGCAGTTGTGGATTCTTCTTTGGATATTTGATCAATGGTGTCTGTGAGGAATACGTATATAACAGGCTGCAATTCAGCTATGGATGGTACTTCACTTTTGTACAAGGTTTCGTGTACTTGGTTCTTATTTATTTGCAGGGCTTCAGAGTAAAGCACATCGTAAATCCATGGAAAACATATGTGAAACTCTCTGCTGTTCTTATGGGATCCCATGGACTGACCAAAGGATCCCTTGCTTTTCTTAATTATCCTGCTCAGCTGATGTTCAAATCTACAAAGGTTCTACCGGTGATGGTGATGGGAGCTTTTATACCTGGGCTGAAGCGGAAGTATCCTGTGCATGAATATGTTTCTGCTGTACTTCTCGTAGTCGGTTTAATCATTTTCACGCTCGCGGATGCTCAAACGTCCCCGAATTTCAATGTTTTGGGAGTGATAATGGTCTCTGGAGCTCTGATACTGGATTCTTTCCTTGGGAATTTACAGGAGGCAATATTTAAAATGAATCCAGCCACTTCACAGATGGAAATGCTGTTCTGTTCGACGGCAGTTGGGCTACCCCTTTTGATCATACCCATGGTGCTAACGGGTGAGCTGTTCAGAGCATGGACCTCCTGCTCCCAGCATTTGTACGTTTATCTGGTGCTCATCTTTGAAGCGATGGCGACTTTCGTTGGTCAGCTATCAGTGCTCTGTCTAATCGCAATTTTCGGTGCCGCGGCAACTGCCATGGTGACCACAGCAAGAAAGGCTCTCACTCTTTTCCTGTCATATATAATTTTCACCAAACCCCTGACGGAGCAGCATGGGACCGGGCTGCTGCTTATATCCATGGGAATCATTCTGAAAATGGTACCACTACCGGATCCCCAGTCGATCGCGAGAAGCAATCCGAAATCTGCCCAAAATATCCCACAAAACGAGGAAGAAGGGAAGCCACTAGTATCGGATTCTGCTTGA___TCGGTCGGTCGCACGCCATTTGTTTCGGGAGGAACAACATTTTCCGGG

Fln Alignment:

sp_v1.1_unigene2952___MGNDDQVITLLGITLTGRPKWQQLLLCSCGFFFGYLINGVCEEYVYNRLQFSYGWYFTFVQGFVYLVLIYLQGFRVKHIVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLKRKYPVHEYVSAVLLVVGLIIFTLADAQTSPNFNVLGVIMVSGALILDSFLGNLQEAIFKMNPATSQMEMLFCSTAVGLPLLIIPMVLTGELFRAWTSCSQHLYVYLVLIFEAMATFVGQLSVLCLIAIFGAAATAMVTTARKALTLFLSYIIFTKPLTEQHGTGLLLISMGIILKMVPLPDPQSIAR----SNPKSAQNIPQNE---EEGKPLV
D7U7R3______________MKNEEQARSLFGISLSDRPKWQQFLICSSGFFFGYLVNGICEEYVYNRLQFSYGWYFTFVQGFVYLVLIYFQGFTTKQMVNPWKTYVKLSAVLMGSHGLTKGSLAFLNYPAQLMFKSTKVLPVMVMGAFIPGLRRKYPAHEYVSAVLLVVGLILFTLADAHTSPNFSVIGVLMVSGALVMDSFLGNLQEAIFTLNPDTTQMEMLFCSTVIGLPFLIPPMLFTGELFKAWNSCSQHLYVYGVLVFEAMATFIGQVSVLSLIAIFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHGSGLLLIAMGIVLKLLPDNKPYKKASLESPTTEKTANPFPREEEKSEEMRPLV

SNPs (tot: 3)

Position	A %	C %	G %	T %	Probability
894	88		11		0.923564
1111		66		33	0.997452
1112		66		33	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain