SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene2926

Length: 1329 nt

Origin of reads: Biogeco_1 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene2926

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Polyketide_cyc2 domain containing protein	-	-	5.0e-12	23%
FL-Next	sp=Abscisic acid receptor PYL8; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	71%
Blast2go	protein	-	-	0.0	85%

Source	GOs	Term	Type	Identity
Blast2go	response to stress	GO:0006950	Biological Process	85%
Blast2go	positive regulation of abscisic acid mediated signaling pathway	GO:0009789	Biological Process	85%
Blast2go	receptor activity	GO:0004872	Molecular Function	85%
Blast2go	protein binding	GO:0005515	Molecular Function	85%
Blast2go	cytoplasm	GO:0005737	Cellular Component	85%
Blast2go	nucleus	GO:0005634	Cellular Component	85%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Polyketide cyclase/dehydrase	IPR019587	-	0.0	85%
Blast2go	START-like domain	IPR023393	-	0.0	85%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: sp_plants

Fln subject: Q9FGM1

Fln msg:

Fln protein: MSANGGSMESEYVWRHHKHEMQENQCSSVLAKRIRAPVHLVWSLVRRFDQPQKYKPFVHSCIVRGGNTEGSIREVNVKSGLPATTSTERLEILDDKEHILSIRILGGDHRLKNYWSIITLHNEVIDGRPGTLALESYVVDVPEGNTKEETRYFVEALIKCNLKSLADVSERLAFQDHTELLER*

Protein Length: 185

Fln nts: AAGAATAACAGCAGGTAAAGATCAGGAAGAAAGTGGAGAGAATCAGAAAAAACAGCCTTCACAGACAGAAAATCCGGAGATGATGAATAGGTTTTGTCTGTGAGTGCTGTTTAGAGGGCTTCTTCCAAAAGGCCGACAGGTGTTAGCCCATGATCTACGAGCACAGCGACAGTGTTCGCATCTCTGGTGTGAGATATAAATAGCTTTGAAGGTTGGCATAGAAGGGAGGGTTTACTAAATTATTGAAGCAGGGATATGGTGGGCATGTGAGCCACC_-_ATGAGCGCCAATGGAGGCAGCATGGAGTCCGAGTATGTGTGGAGGCATCACAAGCATGAGATGCAGGAGAACCAGTGCAGTTCTGTCCTTGCCAAGCGCATCAGGGCCCCTGTTCATCTGGTTTGGTCATTAGTGAGAAGATTTGATCAGCCTCAAAAGTATAAGCCTTTTGTGCATAGCTGTATAGTCCGTGGTGGCAATACTGAAGGGAGCATTCGGGAGGTGAATGTGAAATCTGGCCTTCCAGCTACAACAAGTACCGAAAGACTAGAAATCCTGGATGACAAGGAGCACATTCTCAGTATTAGAATCCTTGGAGGGGACCATCGGTTGAAGAATTATTGGTCAATTATCACTCTGCATAATGAGGTTATTGATGGAAGGCCTGGTACACTGGCGTTAGAATCCTATGTGGTTGATGTTCCTGAAGGAAATACCAAGGAAGAGACTCGCTACTTCGTCGAAGCACTGATAAAATGCAATTTGAAGTCTCTTGCCGATGTGTCTGAGAGACTGGCATTCCAAGACCATACAGAATTACTTGAGAGATGA___TACATTCAGATCTCAGTGCTTTAAAGTTTTGCCCAGATGATGGTTACATCGGAAACACCCACGCTGAAACTCAAATCCACATAGCCTGGAATGATTTCAGAGGACAAGACTCTCAGACAATGTTTGGAAACTTATGTTTGTATGTTTTCATGTTACATGTTCTATTTGATGACAATGTATACTATGGTGTGAGTTTTTGGCTTCGAACATAGATTGGATGGATGCTTTCCCCAGCATACCTTGAAATGGGTTGTGTAACCTACTACTGAGATTGTCTGGCAAATGTGCAAATTCTTCCAGAATCAAATTTCAACCTTCCTTCCATATCGATATGGATTTCAGGCACTATTAATGATAGAATTTCAAACTGTAAAGCTCCAAAAAGATATCTAGTTCTTACCTCTGGAATACCAGAACGGTTTCATAAACTGTACATTGGGTGTTTTGTAAGTAAATCATTCTTATTTTAATATCAATGTATATGATACTCTTGACTTACTT

Fln Alignment:

sp_v1.1_unigene2926___MSANG------GSMESEYVWRHHKHEMQENQCSSVLAKRIRAPVHLVWSLVRRFDQPQKYKPFVHSCIVRGGNTEGSIREVNVKSGLPATTSTERLEILDDKEHILSIRILGGDHRLKNYWSIITLHNEVIDGRPGTLALESYVVDVPEGNTKEETRYFVEALIKCNLKSLADVSERLAFQDHTE
Q9FGM1______________MEANGIENLTNPNQEREFIRRHHKHELVDNQCSSTLVKHINAPVHIVWSLVRRFDQPQKYKPFISRCVVKGNMEIGTVREVDVKSGLPATRSTERLELLDDNEHILSIRIVGGDHRLKNYSSIISLHPETIEGRIGTLVIESFVVDVPEGNTKDETCYFVEALIKCNLKSLADISERLAVQDTTE

SNPs (tot: 18)

Position	A %	C %	G %	T %	Probability
915	75			25	0.996473
948	66		33		1.0
953	66	33			1.0
954	66			33	1.0
957			33	66	1.0
958		33		66	1.0
961			66	33	1.0
962	66	33			1.0
964	66	6			1.0
967		28		71	1.0
969		12		87	0.999964
972		12		87	0.999964
977		12		87	0.999964
978		12	87		0.999964
981			12	87	0.999964
982			12	87	0.999964
988		12		87	0.999964
1260		20		80	0.995493

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain