SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
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GOs
ECs
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Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene2890

Length: 830 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene2890

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SY65_PHYPA	-	-	66%
FL-Next	sp=Translocase of chloroplast 120, chloroplastic; Arabidopsis thaliana (Mouse-ear cress).	-	-	55%
Blast2go	protein	-	-	79%

Source	GOs	Term	Type	e value	Identity
Blast2go	protein targeting to chloroplast	GO:0045036	Biological Process	0.0	79%
Blast2go	chloroplast outer membrane	GO:0009707	Cellular Component	0.0	79%

Full-Lengther Next Prediction

SNPs (tot: 14)

Position	A %	C %	G %	T %	Probability
418		88	11		0.999937
419		88		11	0.999937
420	88	11			0.999937
423	88		11		0.999937
425		11		88	0.999937
427	88			11	0.999937
428			88	11	0.999937
493	87	9		3	1.0
496			9	90	1.0
498			9	90	1.0
511	9			90	1.0
561		5	95		0.997749
583		3		66	1.0
826			25	75	0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain