SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene2787

Length: 1795 nt

Origin of reads: Biogeco_1 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene2787

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	nicotinate-nucleotide diphosphorylase (carboxylating) (EC:2.4.2.19); K00767 nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]	-	-	78%
FL-Next	tr=Predicted protein; subsp. trichocarpa).	-	-	78%
Blast2go	nicotinate-nucleotide pyrophosphorylase	-	-	84%

Source	ECs	Term	Type	e value	Identity
Blast2go	Nicotinate-nucleotide diphosphorylase (carboxylating).	EC:2.4.2.19	-	0.0	84%

Source	KEGGs	Term	Identity
Blast2go	Nicotinate and nicotinamide metabolism	00760	84%
Blast2go	Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid	01064	84%
Blast2go	Metabolic pathways	01100	84%

Source	ECs	Term	Type	e value	Identity
AutoFact	Nicotinate-nucleotide diphosphorylase (carboxylating).	EC:2.4.2.19	-	0.0	78%

Source	KEGGs	Term	Identity
AutoFact	Nicotinate and nicotinamide metabolism	00760	78%
AutoFact	Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid	01064	78%
AutoFact	Metabolic pathways	01100	78%

Source	GOs	Term	Type	Identity
Blast2go	NAD biosynthetic process	GO:0009435	Biological Process	84%
Blast2go	nicotinate-nucleotide diphosphorylase (carboxylating) activity	GO:0004514	Molecular Function	84%
Blast2go	chloroplast	GO:0009507	Cellular Component	84%

Source	InterPros	Term	Type	Identity
Blast2go	Quinolinate phosphoribosyl transferase, C-terminal	IPR002638	-	84%
Blast2go	Nicotinate-nucleotide pyrophosphorylase	IPR004393	-	84%
Blast2go	Aldolase-type TIM barrel	IPR013785	-	84%
Blast2go	Quinolinate phosphoribosyl transferase, N-terminal	IPR022412	-	84%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: tr_plants

Fln subject: B9HJA3

Fln msg: your sequence is longer than subject: 370 - 329

Fln protein: MEVLRCMCWSNYSYNCSTIPRQLSVEAAPRPRVAHRYREISAVISKPTLKTSRGYMTVPPPAHPTYDLKTIINLALAEDAGDKGDVSCLATIPVEREAEAHFLAKEDGVIAGIAMAIMVFEEVDPQLKVDWSQNDGDLVQRGLQFGSVYGSARSILVAERVALNFMQRMSGIATLTKAMADAARPARVLETRKTAPALRLVDKWAVLIGGGENHRMGLFDMVMLKDNHISVAGGITNAIESVEQYLEENNLQMAVEVETRTLEEVKEVLSYTGRGRSVVTRIMLDNMIVPLPNGDVDVSMLKEAVQLINDRFETEASGNVTLDTIGKIGATGVTFISSGALTHSVKALDISLKIDTELALAVGRRTNRA*

Protein Length: 371

Fln nts: GAGATTGACAACTACTCTCCGAGATGATATTGAGGGCACTCTAAGAAAACGAGAAATGTTTGCGTTTTTCATCGTAAAAACTCTGAAATCATATTCATAATTTCACTTCAATTGAGAGGGTGCACCGCGAAGCACATGGCTGATTGGACTTTGGATGCCTAAGTAATCCATATATTCATCTCCGCGTACTTCTCTCTGTCTGTATATCTGATCATATTTTCAAATAAGCAAATTTTC_-_ATGGAGGTTCTGCGGTGTATGTGCTGGAGCAATTATTCTTACAACTGTAGCACAATCCCCAGACAGTTATCTGTTGAAGCAGCGCCCAGACCAAGAGTCGCTCACAGGTATAGAGAAATTTCAGCAGTCATCAGTAAACCCACGCTAAAAACTTCACGTGGGTATATGACAGTGCCACCTCCTGCTCATCCAACTTATGACCTCAAGACCATTATTAATCTAGCCTTAGCTGAAGATGCAGGTGACAAAGGGGATGTGTCTTGTTTGGCAACCATTCCAGTTGAAAGAGAAGCAGAAGCTCATTTTTTGGCAAAAGAAGATGGCGTGATTGCTGGAATTGCAATGGCAATCATGGTATTTGAGGAGGTAGATCCTCAGTTGAAGGTTGATTGGAGTCAGAATGATGGGGATCTTGTTCAGAGAGGTTTACAGTTTGGCTCGGTGTATGGCAGTGCCAGAAGCATTCTTGTGGCAGAAAGAGTTGCTCTCAACTTTATGCAACGAATGAGTGGAATTGCAACTCTTACAAAGGCAATGGCAGATGCTGCAAGGCCTGCACGTGTCTTAGAAACTCGGAAAACTGCCCCAGCTCTACGATTGGTGGACAAATGGGCGGTCCTGATAGGTGGTGGAGAGAATCATAGAATGGGCTTGTTTGACATGGTAATGCTGAAAGATAATCATATTTCTGTAGCTGGAGGAATCACTAATGCCATTGAATCTGTTGAGCAATACTTGGAGGAGAACAATCTTCAGATGGCTGTAGAGGTTGAAACAAGAACTTTAGAGGAAGTGAAGGAGGTTCTGTCATATACTGGTAGAGGTAGATCTGTGGTAACACGCATAATGTTAGACAACATGATTGTGCCACTCCCCAATGGTGATGTTGATGTGTCCATGCTGAAAGAAGCTGTTCAATTGATCAATGATCGATTTGAGACTGAGGCCTCAGGCAATGTTACCCTTGATACTATTGGAAAAATTGGAGCGACTGGAGTGACATTTATTTCCAGCGGGGCTTTGACACATTCTGTAAAGGCATTGGATATATCCCTTAAAATCGATACAGAGTTGGCCTTGGCAGTTGGAAGGCGAACAAATCGTGCATGA___ACTAGACGAAATATTCAATCCTTTTTTATAATTTTATCTGTCTTGTTTCAAGTTAAAGTCAAGCTAATTTTTACATCTTATGAATGATTTCCTAATTAAGATTTGCATTATGCTATTTCAATGTTGCTGGTAAGACAGTCCCAACAGGCCTTTTTGATGTTGAGTGACAAAAAGAAAAATCATAGCCTTTTTGATATTGAGTAACAAATGTCAAAAAGGCAAAGCATAATATGATGCTTACAGTCTGGACTTTGTATTGGTACATTCCTCATCTTTTTCCTTTTACGTATAAAGGAAAATATGCCAAAGAAACAAAAATGTATGCTTGTCACTGTTATCCTCCAATTTTGTTGGAGGGTATAAAAGTTCCGAATTTCTTTGTAGAATTGAAAAATGTGTGTTATCCTCCAATCTTGTTGAAGAGGAAATAAAAGTTACAAATTTCTTT

Fln Alignment:

sp_v1.1_unigene2787___MTVPPPAHPTYDLKTIINLALAEDAGDKGDVSCLATIPVEREAEAHFLAKEDGVIAGIAMAIMVFEEVDPQLKVDWSQNDGDLVQRGLQFGSVYGSARSILVAERVALNFMQRMSGIATLTKAMADAARPARVLETRKTAPALRLVDKWAVLIGGGENHRMGLFDMVMLKDNHISVAGGITNAIESVEQYLEENNLQMAVEVETRTLEEVKEVLSYTGRGRSVVTRIMLDNMIVPLPNGDVDVSMLKEAVQLINDRFETEASGNVTLDTIGKIGATGVTFISSGALTHSVKALDISLKIDTELALAVG
B9HJA3______________MVVKPPSHPTYDMKGVIKLALAEDAGDRGDVTCLATIPFDMEVEAHFLAKEDGIVAGISLAEMIFHEVDPSLKVEWSQKDGDYVQKGLQFGKVSGQAHNIVVAERVVLNFMQRMSGIATLTKTMADAARPACILETRKTAPGLRLVDKWAVLIGGGRNHRMGLFDMVMIKDNHISIAGGIINAIKSVDQYLEQQNLQMEVEVETRTLEEVDEVLRYTSQTKSSLTRIMLDNMVIPLPNGDVDVSMLKDAVEMINRRFETEASGNVTLETVHKIGQTGVTYISSGALTHSVKALDISLKIDTELALQVG

SNPs (tot: 36)

Position	A %	C %	G %	T %	Probability
150		25		75	0.996473
162	75		25		0.996473
201		75	25		0.996473
376	66		33		0.997452
392	66	33			0.997452
531	25		75		0.996473
631	80			20	0.995493
662			60	40	1.0
899		16		66	0.988813
1004		25		75	0.996473
1230		14		85	0.993533
1232			85	14	0.993533
1233	85	14			0.993533
1235		85		14	0.993533
1242	85			14	0.993533
1245		14	85		0.993533
1249	14			85	0.993533
1281	40		60		1.0
1290		16	83		0.994512
1292	83			16	0.994512
1293		16		83	0.994512
1294	83		16		0.994512
1296	83		16		0.994512
1297	16			83	0.994512
1300		83		16	0.994512
1302			16	83	0.994512
1303	83		16		0.994512
1304	83	16			0.994512
1305	83			16	0.994512
1306	83		16		0.994512
1311		16		83	0.994512
1312	83			16	0.994512
1462		50		50	1.0
1497		80	20		0.995493
1567		20		80	0.999996
1579	77		22		0.999999

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain