SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene2545

Length: 1307 nt

Origin of reads: Biogeco_1 Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene2545

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Mitogen activated protein kinase kinase kinase 3, mapkkk3, mekk3, putative n=1 Tax=Ricinus communis RepID=B9RTY0_RICCO	-	-	67%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	46%
Blast2go	protein	-	-	80%

Source	GOs	Term	Type	e value	Identity
Blast2go	protein binding	GO:0005515	Molecular Function	0.0	80%
Blast2go	catalytic activity	GO:0003824	Molecular Function	0.0	80%

Source	InterPros	Term	Type	Identity
Blast2go	Protein kinase, catalytic domain	IPR000719	-	80%
Blast2go	Serine/threonine- / dual-specificity protein kinase, catalytic domain	IPR002290	-	80%
Blast2go	Serine/threonine-protein kinase, active site	IPR008271	-	80%
Blast2go	Protein kinase-like domain	IPR011009	-	80%
Blast2go	Protein kinase, ATP binding site	IPR017441	-	80%
Blast2go	Serine/threonine-protein kinase-like domain	IPR017442	-	80%
Blast2go	Tyrosine-protein kinase, catalytic domain	IPR020635	-	80%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LR19

Fln msg: Distance to subject end: 96 aas, your sequence is shorter than subject: 435 - 902

Fln protein: MGGALHSDLPSPADICVEMPEEGSPARRSLDFMGFGFEPQMESAWDTPKESSSPPAIRWRKGELIGCGAYGRVYMGMNLDSGELLAIKEVLIAANNSSRDKAQAQIQELEEEVKLLHNLSHPNIVRYLGTAREDDALNILLEFVPGGSIASLLGKFGSFTEPVIRMYTKQLLQGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATITGAKSMKGTPYWMAPEVIRQTGHSLPADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPDHLSPPAKDFLLKCLEKEPNLRPTATQLLKHPFLTGGYTDLHPLDQSSNLGRSIKSLRKSGANIRDSCMINTIPSMESSMQDMPNLDSVRYSSLEGEFSEKPGNLKSIWETNMSKGIWNNTSVEDLNCSVRLDSIREDSFTKSFNPMY

Protein Length: 436

Fln nts: ATGGGGGGAGCGCTGCATTCTGATCTGCCCTCCCCTGCTGATATCTGCGTGGAAATGCCAGAGGAAGGAAGTCCTGCAAGGCGATCTCTGGATTTCATGGGATTCGGATTCGAACCCCAGATGGAGTCTGCATGGGATACGCCTAAGGAGAGTAGCAGTCCTCCAGCGATCAGGTGGAGGAAGGGCGAGCTCATTGGGTGTGGAGCTTATGGGCGTGTTTACATGGGTATGAATTTGGATTCTGGAGAGCTCTTGGCCATCAAAGAGGTCTTGATTGCCGCCAACAATTCATCAAGAGATAAGGCGCAGGCCCAAATTCAGGAGCTCGAGGAGGAGGTCAAGCTTCTTCACAATCTGTCGCATCCTAATATAGTGCGTTATCTAGGCACGGCCAGAGAGGATGACGCTTTAAACATTCTTTTGGAGTTTGTTCCTGGTGGGTCCATTGCTTCTCTTCTTGGCAAATTTGGATCCTTTACAGAGCCGGTCATTAGGATGTACACAAAACAACTCTTGCAGGGGCTGGAATATCTTCATAAGAATGGCATCATGCATCGTGACATTAAGGGTGCAAACATTCTTGTCGACAACAAAGGGTGCATCAAATTAGCAGACTTTGGTGCGTCCAAGAAAGTTGTTGAGCTGGCCACGATTACAGGGGCCAAGTCAATGAAAGGAACTCCATATTGGATGGCACCAGAAGTCATTCGCCAAACAGGGCATAGCTTGCCTGCTGATATATGGAGCGTTGGTTGTACTGTTATTGAAATGGCAACAGGCAAGCCCCCTTGGAGCCAACAGTTTCAAGAGGTGGCTGCTTTATTTCACATCGGGACAACAAAGTCACATCCCCCAATTCCAGATCATTTATCACCACCTGCAAAAGATTTTTTACTGAAATGCTTAGAAAAGGAACCAAATTTAAGACCTACTGCAACCCAGTTACTTAAGCATCCCTTTCTTACTGGTGGTTACACAGACTTACACCCTCTGGATCAATCCTCTAATTTGGGCCGCTCTATCAAGTCTCTTAGAAAATCAGGTGCAAATATCAGGGATTCCTGTATGATTAATACTATACCAAGTATGGAGAGTAGCATGCAAGACATGCCAAATCTTGATAGTGTCAGATATTCATCTCTTGAAGGAGAATTCTCAGAAAAGCCGGGAAATTTAAAATCTATTTGGGAGACTAATATGAGCAAGGGTATATGGAATAACACAAGTGTGGAGGACTTGAATTGTTCAGTAAGACTCGATTCTATCAGAGAAGATAGCTTTACCAAGAGCTTCAATCCTATGTATGA

Fln Alignment:

sp_v1.1_unigene2545___ESSSPPAIRWRKGELIGCGAYGRVYMGMNLDSGELLAIKEVLIAANNSSRDKAQAQIQELEEEVKLLHNLSHPNIVRYLGTAREDDALNILLEFVPGGSIASLLGKFGSFTEPVIRMYTKQLLQGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATITGAKSMKGTPYWMAPEVIRQ--TGHSLPADIWSVGCTVIEMATGKPPWSQQFQEVAALFHIGTTKSHPPIPDHLSPPAKDFLLKCLEKEPNLRPTATQLLKHPFLTGGYTDLHPLDQSSNLGRSIKSL------RKSGANIRDSCMINTIPSMESSMQDMP
B8LR19______________ETSVAPG-RWQKGKLLGCGTFGTVYVGFNRETGDMCAMKEVPLVPDDS---KSSESIKQLEQEINLLSGLEHPNIVQYYGSETVEDLFYIYLEYVPGGSIYKLVNDYGPLEEPVIRIYTRQILSGLAYLHSMNTVHRDIKGGNILVDTYGRVKLADFGMAKHINGPAT---PLSLKGSPYWMAPEVLMQKNTGHDLAVDIWSLGCTVIEMATGKPPWS-EYEGAAAMFKVFKSEV-PPIPDSLSPEGRHFVQCCLCRNPAQRPKASQLLEHLFVRNA-TQQDSSDLLASATSSIKCLSVVHSPREKNINTFDSTGMSPILHSGNGKQHQP

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
1005		20		80	0.995493

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain