SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene2446

Length: 888 nt

Origin of reads: Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene2446

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	hmt1, HMT-1; homocysteine S-methyltransferase 1 (EC:2.1.1.10)	-	-	9.94922e-44	61%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	48%
Blast2go	homocysteine s-methyltransferase	-	-	8.40779e-45	75%

Source	ECs	Term	Type	e value	Identity
Blast2go		EC:2.1.1.1-	-	8.40779e-45	75%

Source	GOs	Term	Type	e value	Identity
Blast2go	methionine biosynthetic process	GO:0009086	Biological Process	8.40779e-45	75%
Blast2go	homocysteine S-methyltransferase activity	GO:0008898	Molecular Function	8.40779e-45	75%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Homocysteine S-methyltransferase	IPR003726	-	8.40779e-45	75%

Full-Lengther Next Prediction

SNPs (tot: 47)

Position	A %	C %	G %	T %	Probability
241	66			33	0.997452
242	66			33	0.997452
244			66	33	0.997452
247	40			60	1.0
321	85		14		0.993533
322		12		87	0.992554
324	75		12	12	0.975346
325		12	87		0.992554
326			87	12	0.992554
327	12			87	0.992554
328		12	87		0.992554
329		12	87		0.992554
330		12		87	0.992554
333			12	87	0.992554
334	11	11		77	0.968132
335		11	88		0.923564
338		11	88		0.923564
340	88	11			0.923564
341	11	88			0.923564
343	88			11	0.923564
344		88	11		0.923564
345			11	88	0.923564
347		88		11	0.923564
348	88		11		0.923564
349	88			11	0.923564
351	72		18		0.999994
352	81			18	0.999994
354	72		18		0.999994
355	72			27	1.0
356		9	18	72	0.999994
359	81			18	0.999994
360	81		18		0.999994
363		81		18	0.999994
364	81		18		0.999994
366		18		81	0.999994
367	18			81	0.999994
370	81	18			0.999994
476		15	84		0.999986
482		13	86		0.999973
483	6		13	80	0.999961
487	13	80	6		0.999961
488		13	86		0.999973
492	78		14	7	0.999974
495	85		14		0.999981
496			78	14	0.999974
499	78	21			1.0
608			90	10	0.90298

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain