SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene2112

Length: 1037 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene2112

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Beta-fructofuranosidase, soluble isoenzyme I n=1 Tax=Daucus carota RepID=INVB_DAUCA	-	-	54%
FL-Next	sp=Beta-fructofuranosidase, soluble isoenzyme I; Daucus carota (Carrot).	-	-	58%
Blast2go	acid invertase	-	-	73%

Source	InterPros	Term	Type	Identity
Blast2go	Glycoside hydrolase, family 32	IPR001362	-	73%
Blast2go	Concanavalin A-like lectin/glucanase	IPR008985	-	73%
Blast2go	Glycosyl hydrolases family 32, N-terminal	IPR013148	-	73%
Blast2go	Glycosyl hydrolase family 32, C-terminal	IPR013189	-	73%
Blast2go	Glycosyl hydrolase family 43, five-bladed beta-propellor domain	IPR023296	-	73%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: sp_plants

Fln subject: P80065

Fln msg: Distance to subject end: 80 aas, your sequence is shorter than subject: 345 - 661

Fln protein: FPEDPSDPLLRKWVKSEANPVLVPPKGVGSKDFRDPTTGWIGKDGIWRIAIGSKLGMTGVTLVFKTKDFIEYEQENILHSVNGTGMWECVDFFPVAVSGIKGLDTSANGVGVKHVLKASFDDDKNDYYAIGTYDLEKQRFIPDDPAVDVGLGLRLDYGKYYASKSFYDPLKQRRILWGWVGETDSEQDDLRKGWASLQTVPRAVWFDDKTKANIIQWPIEEIDELRSVELVVENELLRPGSVVEVGATDCAQLDIELVFEFPDAAAIEAVEGDSVYSCSNGGGAAGRGRLGPFGLLVLAEKNLTEQTAVYFYVAKSADGQLQTFLCHDETRSSLASELILGIHGS

Protein Length: 346

Fln nts: TTTCCGGAGGACCCATCCGACCCGCTTCTGCGAAAATGGGTGAAGTCGGAGGCTAATCCCGTTCTAGTCCCGCCTAAGGGGGTCGGGTCCAAGGATTTCAGGGATCCGACTACGGGCTGGATCGGCAAAGACGGGATTTGGCGGATCGCGATCGGATCAAAGCTCGGTATGACAGGCGTGACGCTAGTGTTCAAGACGAAGGACTTCATCGAGTACGAGCAGGAGAACATTTTGCATTCCGTCAACGGCACGGGCATGTGGGAATGCGTGGATTTCTTTCCCGTGGCCGTCTCCGGAATTAAGGGTTTGGACACTTCTGCGAACGGGGTGGGCGTGAAACATGTGCTCAAGGCCAGTTTCGATGACGACAAGAACGATTATTATGCGATTGGAACCTACGACCTTGAGAAACAGAGGTTTATCCCTGATGATCCTGCTGTGGACGTCGGGCTCGGTCTACGGCTTGATTATGGAAAATATTATGCTTCCAAGTCTTTCTATGATCCGCTGAAGCAGAGAAGAATTCTGTGGGGATGGGTAGGAGAAACCGACAGCGAACAAGACGATCTAAGAAAAGGCTGGGCTTCCTTGCAGACAGTTCCCAGAGCTGTTTGGTTTGATGACAAGACGAAGGCAAATATCATCCAATGGCCGATTGAAGAAATCGACGAACTGCGGTCGGTTGAGCTTGTCGTCGAGAACGAGTTGCTTCGGCCGGGTTCTGTGGTGGAAGTCGGTGCAACAGACTGTGCTCAGTTGGATATTGAGCTCGTTTTTGAATTCCCGGACGCCGCTGCCATTGAAGCGGTCGAAGGCGACTCAGTCTACAGCTGCAGCAATGGTGGAGGAGCTGCTGGTAGAGGCAGATTGGGACCTTTTGGGTTGCTGGTCTTAGCCGAGAAAAATCTGACGGAACAGACGGCCGTCTATTTCTACGTTGCGAAATCTGCCGACGGCCAATTGCAGACCTTTTTATGCCATGACGAAACCAGATCCTCGCTAGCATCTGAACTCATACTGGGGATCCATGGGAGCTC

Fln Alignment:

sp_v1.1_unigene2112___FPEDPSDPLLRKWVKSEANPVLVPPKGVGSKDFRDPTTGWIGKDGIWRIAIGSKLGMTGVTLVFKTKDFIEYEQ-ENILHSVNGTGMWECVDFFPVAVSGIKGLDTSANGVGVKHVLKASFDDDKNDYYAIGTYDLEKQRFIPDDPAVDVGLGLRLDYGKYYASKSFYDPLKQRRILWGWVGETDSEQDDLRKGWASLQTVPRAVWFDDKTKANIIQWPIEEIDELRSVELVVENELLRPGSVVEVGATDCAQLDIELVFEFPDAAAIEAVEGDSVYSCSNXXXXXXXXXXXXXXXXXXAEKNLTEQTAVYFYVAKSADGQLQTFLCHDETRSSLASELILGIHGS
P80065______________YPANLSDPLLLDWIKYPDNPVMFPPPGIGSTDFRDPTTAWIGRDGKWRITIGSKVNKTGISLMYKTTDFITYELLDNLLHAVPGTGMWECVDFYPVSVTGSNGLDTSVNGPGVKHVLKSSLDDDRHDYYALGTYDPINDKWTPDNPELDVGIGLRLDYGKYYASKTFYDQDKERRLLWGWIGETDSESADLLKGWASVQSIPRTVVFDKKTGTNILQWPVKEVESLRSRSYEIDDVELKPGSLVPLKISSAAQLDIVASFEVDEEAFKGTYEADASYNCTASEGAAGRGILGPFGILVLADDPLSELTPVYFYIAKGVDGNAKTYFCADQSRSSTASDVDKEVYGS

SNPs (tot: 8)

Position	A %	C %	G %	T %	Probability
128	71			28	1.0
129	71		28		1.0
130	71			28	1.0
131		28	71		1.0
134			71	28	1.0
135		28	71		1.0
136	28		71		1.0
1000	12		87		1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain