SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene1686

Length: 1020 nt

Origin of reads: Biogeco_1 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene1686

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	phosphatidic acid phosphatase-related / PAP2-related [Arabidopsis thaliana] emb\|CAA22160.1\| putative protein [Arabidopsis thaliana] emb\|CAB79210.1\| putative protein [Arabidopsis thaliana] gb\|AAO64149.1\| unknown protein [Arabidopsis thaliana] gb\|AAP04076.1	-	-	4.0e-14	39%
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	0.0	50%
Blast2go	protein	-	-	1.22754e-24	58%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Phosphatidic acid phosphatase type 2/haloperoxidase	IPR000326	-	1.22754e-24	58%
Blast2go	Phosphatidic acid phosphatase/chloroperoxidase, N-terminal	IPR016118	-	1.22754e-24	58%

Full-Lengther Next Prediction

SNPs (tot: 23)

Position	A %	C %	G %	T %	Probability
309	66		33		0.997452
505		30	70		1.0
539		14		85	0.993533
555	14		85		0.993533
557	85			14	0.993533
558	85			14	0.993533
634	83		16		0.994512
635		16		83	0.994512
640		16		83	0.994512
641	16		83		0.994512
642		16	83		0.994512
643			83	16	0.994512
645	16		83		0.994512
672		85		14	0.993533
691	28			71	1.0
693	42		57		1.0
742	20			80	0.995493
743	20			80	0.995493
744	20			80	0.995493
745	20	80			0.995493
746	20			80	0.995493
844		75	25		0.996473
886	75		25		0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain