SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene1236

Length: 845 nt

Origin of reads: Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene1236

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	3-oxo-5-alpha-steroid 4-dehydrogenase family protein / steroid 5-alpha-reductase family protein	-	-	4.0e-33	46%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	90%
Blast2go	protein	-	-	0.0	67%

Source	GOs	Term	Type	e value	Identity
Blast2go	chloroplast envelope	GO:0009941	Cellular Component	0.0	67%

Source	InterPros	Term	Type	e value	Identity
Blast2go	3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal	IPR001104	-	0.0	67%

Full-Lengther Next Prediction

SNPs (tot: 53)

Position	A %	C %	G %	T %	Probability
95	33		66		0.997452
181	33	66			0.997452
196		33	66		0.997452
276		25		75	1.0
279	75	25			1.0
280			25	75	1.0
282		75	25		1.0
283	25	75			1.0
286	75			25	1.0
287	75			25	1.0
290	66	33			1.0
291			77	22	0.999999
292			88	11	0.923564
293		77		22	0.999999
294		88	11		0.923564
295	22			77	0.999999
296	77	22			0.999999
297		12		87	0.992554
299	12	12		75	0.975346
300	12			87	0.992554
305	88	11			0.923564
310		11	88		0.923564
311	11			88	0.923564
312		11		88	0.923564
314		11	88		0.923564
315	12	75			0.975346
317		90	10		0.90298
318		90		10	0.90298
320	90		10		0.90298
322			10	90	0.90298
324		10		90	0.90298
325		10		90	0.90298
328			10	90	0.90298
329			10	90	0.90298
332	86	13			0.999973
333	13		86		0.999973
336		13		86	0.999973
357			13	86	0.999973
409	13		86		0.999973
410			13	86	0.999973
452	11		88		0.999937
473			11	88	0.999952
508		12		87	0.999964
557	83		16		0.999991
559		83		16	0.999991
581		80		20	0.999996
588		20		80	0.999996
591		80		20	0.999996
610		88		11	0.923564
635		88	11		0.923564
650			11	88	0.923564
671		83		16	0.994512
695	80		20		0.995493

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain