SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene1114

Length: 1242 nt

Origin of reads: Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene1114

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Peroxidase 53 n=3 Tax=Arabidopsis RepID=PER53_ARATH	-	-	61%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	77%
Blast2go	peroxidase	-	-	79%

Source	ECs	Term	Type	e value	Identity
Blast2go	Peroxidase.	EC:1.11.1.7	-	0.0	79%

Source	KEGGs	Term	Identity
Blast2go	Phenylalanine metabolism	00360	79%
Blast2go	Methane metabolism	00680	79%
Blast2go	Phenylpropanoid biosynthesis	00940	79%
Blast2go	Biosynthesis of phenylpropanoids	01061	79%
Blast2go	Metabolic pathways	01100	79%
Blast2go	Biosynthesis of secondary metabolites	01110	79%

Source	GOs	Term	Type	Identity
Blast2go	heme binding	GO:0020037	Molecular Function	79%
Blast2go	peroxidase activity	GO:0004601	Molecular Function	79%
Blast2go	plasma membrane	GO:0005886	Cellular Component	79%

Source	InterPros	Term	Type	Identity
Blast2go	Plant peroxidase	IPR000823	-	79%
Blast2go	Haem peroxidase, plant/fungal/bacterial	IPR002016	-	79%
Blast2go	Haem peroxidase	IPR010255	-	79%
Blast2go	Peroxidases heam-ligand binding site	IPR019793	-	79%
Blast2go	Peroxidase, active site	IPR019794	-	79%

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NN21

Fln msg: your sequence is shorter than subject: 290 - 324

Fln protein: SIVGQVIQQALQTDTRIAASLLRLHFHDCFVNGCDGSVLLNDTANFTGEQTAGPNNNSIRGFGVVDDIKTAVENACNATVSCADILAIAAQQSVSLSGGPSWTVQLGRRDSTTASSTLPNTALPGPTDSLSTIITKFSNVGLSVTDVVALSGGHTIGRARCTVFSARLYNFNGTGSPDPTLNSSYLSTLQSTCPQNGSANTLTSLDPGTPDTFDNNYFANLQNQMGLLQSDQELLSTSGASTISTVNDYTSSQSDFFSNFSNSMINMGNISPLTGTSGEIRLNCGQING*

Protein Length: 291

Fln nts: CTAGCATAGTGGGGCAGGTAATCCAGCAAGCTCTGCAGACAGATACAAGGATAGCGGCCTCTCTCCTCCGTTTACATTTTCACGACTGCTTTGTCAATGGCTGCGATGGATCGGTCCTTTTAAATGACACTGCAAATTTCACAGGGGAGCAGACGGCAGGCCCTAACAACAATTCTATCCGGGGCTTCGGCGTTGTGGACGACATTAAAACGGCAGTAGAAAACGCGTGCAACGCAACAGTATCGTGTGCTGACATACTCGCTATAGCCGCACAGCAGTCCGTCTCACTGTCTGGTGGTCCGTCATGGACTGTGCAGTTAGGTAGACGAGATAGCACGACCGCCAGTTCAACTCTTCCCAACACAGCCCTTCCTGGACCGACGGATTCGCTGTCCACTATCATAACAAAGTTCTCTAATGTTGGGCTTTCCGTTACGGATGTCGTTGCTTTGTCAGGGGGACATACAATTGGGCGAGCTCGGTGCACAGTGTTCAGCGCTAGACTCTACAATTTCAACGGAACGGGCAGTCCGGATCCGACACTGAATTCCTCCTATCTATCCACCTTGCAAAGCACGTGCCCGCAGAATGGAAGCGCGAATACGTTAACGTCACTGGATCCAGGGACTCCAGATACGTTCGACAACAACTACTTTGCAAATCTGCAGAATCAGATGGGTCTGCTTCAGTCGGATCAAGAACTGCTTTCCACATCGGGAGCAAGCACCATCTCTACTGTCAATGATTATACGAGTAGCCAATCCGATTTCTTCTCCAACTTTTCCAACTCGATGATCAACATGGGGAACATAAGTCCTCTGACGGGAACAAGCGGAGAAATCCGCCTGAATTGCGGGCAGATTAATGGTTAG___ATTCCTCTGAAATATCAATTCTACCAAATTGAAATAAGTGCAACCAATGTTGTGAAGAAATATGTATCTTATGATATCGATTATCGTGAACAGCCGCCAGTGTGAACGAATTGAATTAATAAGGCCTTGACGAAGGGAAAGGTTGTAAGTTCATCTGTGTTAGCGTTACCAGAAATGTATGTATTAAACACCGCTTTTAAGTTTTCCATGCTTTTCTGCAATTAAGGGAGCTTTAAATATGGCAGATCACAAGCGGTGTGGACTCTGAACGATTCACCATGGTTTACCTGCTTTATCTGGGCACAAGCATAATTGGTTTTCCTCCACCATAAAGATTGGAATGTCCATGTTTTCTTCGTAATTTGGCGGT

Fln Alignment:

sp_v1.1_unigene1114___SIVGQVIQQALQTDTRIAASLLRLHFHDCFVNGCDGSVLLNDTANFTGEQTAGPNNNSIRGFGVVDDIKTAVENACNATVSCADILAIAAQQSVSLSGGPSWTVQLGRRDSTTASSTLPNTALPGPTDSLSTIITKFSNVGLSVTDVVALSGGHTIGRARCTVFSARLYNFNGTGSPDPTLNSSYLSTLQSTCPQNGSANTLTSLDPGTPDTFDNNYFANLQNQMGLLQSDQELLSTSGASTISTVNDYTXXXXXXXXXXXXXXXXXXXXXPLTGTSGEIRLNCGQING
A9NN21______________SIVGQVLQQALQKDSRMAASLIHLFFHDCFVNGCDGSVLLSNSANFTGEQT---NTSSLRGFGVVDDMKAAVENECSATVSCADILAIAAERSVSMSGGPSWNVQLGRRDSTTANATLVKTAFASPTDSLSTIITKFQKLGFSVTDVVALSGAHTIGRARCQTFSSRLYNFSGTAKPDPTLNSCYLSTLQSACPQNGNMSSITSFDPGTPNTFDNNYFINLQNNMGLLQSDQELLSTTGASTIFTVNEFSNSQANFFSNFSNSMIKMGNISPLTGTRGEIRLNCWKVNG

SNPs (tot: 4)

Position	A %	C %	G %	T %	Probability
621	20	80			0.995493
1032	20			80	0.995493
1034	80		20		0.995493
1036		80	20		0.995493

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain