SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene1113

Length: 1741 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene1113

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Lipase precursor, putative (EC:3.1.1.73)	-	-	60%
FL-Next	tr=Predicted protein; subsp. trichocarpa).	-	-	63%
Blast2go	lipase precursor	-	-	76%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Lipase, class 3	IPR002921	-	0.0	76%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: tr_plants

Fln subject: B9HSE7

Fln msg:

Fln protein: MVHSWRWENLKIFILLVLCSPILCAGRDLRTGNLVPKHHGHIYNRTVAKILAEYASTVYMSDLNALISWTCSRCSGLTKNFQLIELIVDVEHCLQAFVGVAEDLGAIVIAFRGTQENSIRNWVEDLLFKQLDLNYPGMSGSMVHQGFYSAYHNTTLRPRILEAVEKIQKRNNALSIMITGHSMGGAMASFCALDLTVNYGAKGVQVVTFGQPRIGNSVFADFYNTFVPKHIRVSHAHDIVPHLPPYYTHFPQRTYHHFPQEVWIHNIDFGSLVYEVERICDGSGEDPTCSRSVSGNSITDHLEYYGVSMQAETWGTCGWVVQDDQTGGNDGKVDIDIVSLEMSTSVDALPKANQ*

Protein Length: 356

Fln nts: ATGGGGCATTTGTGATAAGAGGCAACGCAAAGGAATCGGGCTCTCGACATTCATATTCGAATATTCCCTCATATGAAGACCCTGGTCTAGCTTAACCACACACATAAACGGGAAACAGGGAAAACATGCGACTATTCGTCGAGTTGTTTCTCCCTGCCGTCGAACCTGCAGAAAATTAAATATACCATCTGATTGCACAGTGCTATGATTTGATCATTGTGCATCTTGAGAAGGTTGATGATTGGGCACACTACATACCCGACTGTGCCAACTACATTGCATAGCCGCTTAAATTAGCAATCATCTTCATTTAAGACAAAGACT_-_ATGGTTCATTCTTGGCGGTGGGAAAATCTCAAAATTTTCATTCTGTTGGTCCTGTGCAGCCCTATACTTTGTGCAGGAAGAGATTTGAGGACAGGGAATCTGGTTCCCAAACATCATGGACACATCTATAATCGCACGGTTGCCAAGATTCTTGCAGAATATGCATCTACGGTGTATATGAGTGACCTGAATGCTCTTATCTCTTGGACTTGTTCGAGATGCAGTGGTTTGACAAAGAACTTCCAGCTGATAGAACTCATAGTGGATGTAGAACATTGCCTTCAGGCATTTGTGGGTGTAGCAGAAGACCTTGGGGCCATTGTCATTGCATTTAGGGGTACACAAGAGAACAGCATTCGGAACTGGGTAGAAGATTTGCTTTTCAAGCAGCTTGATCTTAATTACCCTGGCATGTCTGGTTCAATGGTACATCAAGGATTTTATTCTGCCTACCATAATACAACATTGCGTCCGAGGATTTTAGAAGCAGTAGAGAAAATCCAGAAAAGGAATAATGCACTATCCATTATGATTACAGGGCATTCAATGGGTGGAGCTATGGCTTCCTTTTGTGCACTTGATCTTACGGTAAACTATGGAGCAAAGGGTGTCCAAGTTGTGACCTTTGGGCAGCCTCGTATTGGAAATTCGGTGTTTGCCGATTTCTATAATACATTTGTACCAAAACATATACGTGTCTCTCATGCCCATGATATTGTTCCACATTTGCCTCCATATTACACCCATTTCCCTCAACGAACATACCACCATTTCCCTCAAGAGGTTTGGATTCACAATATCGATTTTGGCAGTTTAGTATATGAGGTAGAAAGAATTTGTGATGGTTCTGGAGAAGACCCAACATGTAGCAGATCAGTATCTGGTAACAGCATCACAGATCATCTAGAGTACTATGGTGTAAGCATGCAAGCAGAGACATGGGGAACGTGTGGATGGGTTGTGCAGGACGATCAGACTGGTGGGAACGACGGTAAAGTGGATATTGATATTGTTTCATTGGAGATGTCAACCAGCGTGGATGCCTTGCCAAAAGCTAATCAATGA___TCATGAGATGAAATTTCTCTGATCCTTCCCTTACGCAAAGAAAGTTATAATATATTTCATCTCTTTGAATACTTATCGTTGATGATGAAATTATGTACCACAATTAACTTGCAAATTTCTTGAGATTTCCTGCCAATGATTCCCACATATAAGTTGCATTATTTCATGTTAAAGCTTAAATATGGGGTCTCTAATTTTATTTCACTCAGTTTGTTTACACCAACATATGACTAGCTCATCTAATTCTACAAATTGTGAAAACAGAAAAGGATGGTAGTTTTGTAACATTTATTCATCACTGAGATTCGTGAGAATAAGCAACTGTTATTAAGTTTGTCTTGGGTGTTATGGC

Fln Alignment:

sp_v1.1_unigene1113___RWENLKIFILLVLCSPILCAGRDLRTGNLVPKHHGHIYNRTVAKILAEYASTVYMSDLNALISWTCSRCSGLTKNFQLIELIVDVEHCLQAFVGVAEDLGAIVIAFRGTQENSIRNWVEDLLFKQLDLNYPGMSGSMVHQGFYSAYHNTTLRPRILEAVEKIQKRNNALSIMITGHSMGGAMASFCALDLTVNYGAKGVQVVTFGQPRIGNSVFADFYNTFVPKHIRVSHAHDIVPHLPPYYTHFPQRTYHHFPQEVWIHNIDFGSLVYEVERICDGSGEDPTCSRSVSGNSITDHLEYYGVSMQAETWGTCGWVVQDDQTGGNDGKVDI
B9HSE7______________RWFILAIFVCLLAFS----CGRELMAEHKHADNHLTAYNHSLATILVEYASAVYMSDLTQLFTWTCPRCSGLTAGFDIIELLVDVEHCLQSFVGVAKDLNAIVIAFRGTQEHSIQNWIEDLYWKQLDINYPGMPDAMVHHGFYSAYHNTTIRPGILNAVERAKKYYGDLNIIVTGHSMGGAMAAFCGLDLVVNTEAKNVQVMTFGQPRVGNAAFASYYSQLVPNTIRVTNDHDIVPHLPPYYRYFPQKTYHHFPREVWLHNIGVGSLVYEVEKVCDGSGEDPDCSRSVAGNSIADHLVYFGVELMCETWRSCGIVM--DSLAKEYGKMDV

SNPs (tot: 10)

Position	A %	C %	G %	T %	Probability
722		85		14	0.993533
904			12	87	0.992554
1071	90			10	0.90298
1283	10		90		0.90298
1339			10	90	0.90298
1340	10			90	0.90298
1342	90	10			0.90298
1344			10	90	0.90298
1347	88	11			0.923564
1361	11		88		0.923564

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain