SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene1040

Length: 1789 nt

Origin of reads: Biogeco_1 Biogeco_2 Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene1040

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	TPX2 domain containing protein	-	-	4.0e-07	80%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	88%
Blast2go	protein	-	-	4.85575e-38	56%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Xklp2 targeting protein	IPR009675	-	4.85575e-38	56%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9P0B3

Fln msg:

Fln protein: MVLLTLVRLRTIAKWNLLLSVWWTVRYPLADSHLIHYHGRNGQHFRRTGIWRRWRNVRLQVQLLKRRHTLMPITERLPPKELCYSCP*

Protein Length: 89

Fln nts: ATGGGGTACTGAATGCCAAAAAGGAAACGCTGATACGATCTCAAAATCTATCTTCACTGCTATCCTGTGATTCTCCAACTTCTGGGGACATCTATTGGGAAGAAATAATCGGGTCAAACTTCTCCACTGCAGGCCTGCATTGTCCTTCAGTCTTCAAGCCCTTCATTGGGAAGAATCTCTCAACAATAATACTGTTGGCGGTTGTTCACAGTTGAAGGTTGGGGAAGCCATGGGCGAAGAGGAAGCTTGCTCTGAATGGAGTCCTG_-_ATGGTCTTACTGACACTCGTGAGATTAAGGACCATAGCCAAGTGGAACCTGCTCCTGAGTGTCTGGTGGACGGTTCGGTATCCTTTGGCAGATTCTCACTTGATACATTATCATGGGAGAAATGGTCAGCATTTTCGCAGAACAGGTATCTGGAGGAGGTGGAGAAATGTTCGACTCCAGGTTCAGTTGCTAAAAAGGCGGCATACTTTGATGCCCATTACAGAAAGATTGCCGCCCAAAGAGCTTTGCTACAGCTGTCCCTAA___CAGAAGAAGAGAACAACCGGTACAAGGATATGGATGCCCTAGCTCCTCAAGTGCAAAATGAACAAGTGCCTAATGGTGATCCTGCATTGTATATTGACAATAACGCATGCCATGGATCCAATACAGAGGGTGGGGTTCATGACATGAATAAAGATGAAGAGTCTAAAGAGGAAGTAATCCAGGATACACCTTTACAAATAGATGAAGCTCACAATGAAGAAATACCTCTAGAGGTAGACGTATCTTCTTTAACTGTTGAAACTAATGTACCTTCACAAAATGATGAAGTCCACCATGAAGAAGTACCTCTGGAGGCAGTATCTTCAATTGCTGAGGCCAAATTAGACATTAATAGTGTCCCAGAGGATCTGAATATGAATGGAGCAGAGAAGCTTGCTTTGCCTAAACAAGATAGTACCCTTGCAAAGGTGGAAACCATTCCCAAAGGCCTGGAAGGGGGTGCAATGGGAAAAAAGAATCTTTGAAGCATGCAAAAGAAGAACCCAGGGAATTCAAACAAAAGAAAAAGCTCCCTTCCAAGGAGACTGTTGCTTCAAATGGACACGTGCAAGCTCAAATGAAGAAGAACAAAACCGAATCTGCAACAAATATCTCAAACAGTCACACAACTAGGCCTCCAAAGCCTCAAGTTTCTTCTTCTATAAAAAATCTTCCCAACGTGTCAACAAAAATGGAAAAGGATGTGATGTCCAAGAGGAAAATAACAGGCATGGACATAAGTCGGAGCCAAAAGCCAGCACCTGTTTCCTTGCACATCTCACTGAGTTTGGGATCCCAACGTCCTAATACCACAGTGCCTCAGCCATTTGCTCTTGCAACAGAAAAACGGGCCTCAATTGTGGAAAATCTTGGAGACAAAGAAATTGTGAAGCGTGCTTTCAAGGCTTTTCGACATAATTTATCAATGTCATCATCTCCAAAAGCTGATATTTCAAGGGGTTCCAGTGATATTGTTGCGGCCCAGGGCCCTGGTGTCCAAGGAAGGAGGTTGGGTGCATTACACCATGCTTCATCTCCCGTTTGTAGACACCTTGAGGAGAATGAAGGAAAATCCAGGAAGTTGGCTGATTCCAAAAAGGGACAAGATAAATGCCATTCAACTGAAAACAGTGCTAATGGGAGAAAATCAATTCCAAAGGTGACTTCAACAACATTTAGCTTGAAAAGTGATGAAAGAGCAGAGAAGCGGAAAGAGTTCTATATGAAGTTAGAAGAAAAATTGAATGCCAAGGAAGACG

Fln Alignment:

sp_v1.1_unigene1040___AKWNLLLSVWWTVRYPLADSHLIHYHGRNGQHFRRTGIWRRWRNVRLQVQLLKRRHTLMPITERLPPKELCYSCP
A9P0B3______________AKWNLLLSVWWMVRYLLVDSHLIHYHGRNGQHFPRTDIWRRWRNVRLQVQLLRRRHTLMPITKRLPLKELCYSSP

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain