SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene1008

Length: 807 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene1008

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Whole genome shotgun sequence of line PN40024, scaffold_5.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7U341_VITVI	-	-	72%
FL-Next	sp=Phospholipid--sterol O-acyltransferase; Arabidopsis thaliana (Mouse-ear cress).	-	-	69%
Blast2go	phosphatidylcholine acyltransferase-like	-	-	81%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Lecithin:cholesterol/phospholipid:diacylglycerol acyltransferase	IPR003386	-	0.0	81%

Full-Lengther Next Prediction

SNPs (tot: 10)

Position	A %	C %	G %	T %	Probability
408		11		88	0.923564
413			11	88	0.923564
414	88			11	0.923564
415			11	88	0.923564
420			88	11	0.923564
421	88			11	0.923564
424	88		11		0.923564
429		11	88		0.923564
431	88	11			0.923564
537			14	85	0.993533

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain