SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene1003

Length: 1259 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene1003

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Potassium efflux antiporter n=3 Tax=rosids RepID=B9ICA8_POPTR	-	-	74%
FL-Next	sp=K(+) efflux antiporter 2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress).	-	-	88%
Blast2go	potassium efflux antiporter	-	-	92%

Source	InterPros	Term	Type	Identity
Blast2go	Regulator of K+ conductance, N-terminal	IPR003148	-	92%
Blast2go	Cation/H+ exchanger	IPR006153	-	92%
Blast2go	NAD(P)-binding domain	IPR016040	-	92%

Full-Lengther Next Prediction

Fln status: Putative C-terminus

Fln database: sp_plants

Fln subject: O65272

Fln msg: STOP codon was not found. Distance to subject end: 12 aas, your sequence is shorter than subject: 419 - 1174

Fln protein: GFQAIAEALGVAAVKALVAITGIIAGGRLLLRPIYKQIAENQNAEIFSANTLLVVLGTSVLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLVAKFPVILGALSLLIGGKTILVASVGRLFGISSVAAIRVGLLLAPGGEFAFVAFGEAVNQGIMTPQLSSLLFLVVGLSMAITPWLAAGGQLIASRFEQHDVRSLLPAESETDDLQDHIIICGFGRVGQIIAQLLSERLIPFVALDVRSERVAAGRALDLPVYFGDAGSREVLHKVGAERAAAAAVTLDTPGANFRTVWALSKYFPNVKTFVRAHDVDHGINLEKAGATAVVPETLEPSLQLAAALLAQAKLPASEIAATINEFRSHHLSELTELCESSGSSPGYGFSRIMGRTRQQASDIDD

Protein Length: 420

Fln nts: TTGGCTTTCAAGCCATAGCTGAAGCTCTTGGTGTGGCTGCAGTCAAAGCACTAGTTGCAATAACTGGTATCATTGCTGGAGGGCGCTTGCTTCTACGTCCTATCTATAAGCAAATTGCAGAGAATCAAAATGCGGAGATATTTTCTGCAAATACGTTGCTTGTTGTTCTTGGGACAAGTGTTCTGACAGCTAGGGCTGGCCTTTCTATGGCATTGGGAGCTTTTCTAGCTGGTTTGCTTCTAGCAGAAACTGAGTTTTCTTTGCAAGTGGAATCAGACATTGCTCCGTATCGGGGCCTTCTTCTAGGTCTCTTTTTCATGACAGTTGGGATGTCAATAGATCCAAAATTGCTGGTTGCAAAGTTTCCAGTTATTTTGGGTGCTCTTTCTCTCCTGATTGGTGGGAAAACTATTTTGGTTGCATCAGTAGGGCGACTTTTTGGGATATCAAGTGTTGCTGCCATCCGTGTTGGTCTTTTATTGGCACCAGGTGGAGAATTCGCATTTGTAGCATTTGGTGAAGCTGTAAATCAGGGTATAATGACCCCACAATTATCATCATTGCTATTTTTGGTTGTTGGCTTGTCAATGGCAATTACTCCATGGCTTGCAGCAGGTGGTCAGTTGATTGCATCTCGTTTTGAGCAGCATGATGTGCGAAGTCTGTTGCCGGCTGAGAGTGAGACAGATGATTTGCAAGACCATATTATCATATGTGGATTTGGTCGTGTTGGGCAGATCATTGCACAGCTTCTATCGGAGCGATTAATTCCATTTGTGGCACTTGATGTAAGAAGTGAACGTGTTGCAGCAGGACGTGCTCTTGATCTTCCTGTGTACTTTGGGGATGCAGGCAGTAGAGAGGTACTTCACAAAGTGGGGGCAGAGAGAGCAGCAGCTGCTGCAGTAACTTTGGATACACCTGGTGCCAATTTTCGTACTGTTTGGGCTCTCAGCAAGTATTTCCCAAATGTGAAAACATTTGTCCGTGCACATGATGTAGACCATGGTATTAATCTCGAGAAAGCTGGTGCCACAGCGGTTGTGCCTGAAACCTTGGAGCCAAGCCTTCAGTTAGCAGCTGCTCTCCTGGCACAGGCCAAGCTACCTGCATCGGAAATTGCAGCAACAATCAATGAATTTCGGTCTCACCACCTTTCTGAGCTTACTGAGCTGTGTGAGTCAAGTGGTAGTTCTCCTGGGTATGGCTTTTCGCGAATAATGGGGAGAACTAGGCAGCAGGCATCAGATATTGATGAT

Fln Alignment:

sp_v1.1_unigene1003___TGIIAGGRLLLRPIYKQIAENQNAEIFSANXXXXXXXXXXXXARXXXXXXXXXXXXXXXXXETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLVAKFPVILGALSLLIGGKTILVASVGRLFGISSVAAIRVGLLLAPGGEFAFVAFGEAVNQGIMTPQXXXXXXXXXXXXMAITPWLAAGGQLIASRFEQHDVRSLLPAESETDDLQDHIIICGFGRVGQIIAQLLSERLIPFVALDVRSERVAAGRALDLPVYFGDAGSREVLHKVGAERXXXXXVTLDTPGANFRTVWALSKYFPNVKTFVRAHDVDHGINLEKAGATAVVPETXXXXXXXXXXXXXXXXXXXXEIAATINEFRSHHLSELTELCESSGSSPGYGFSR
O65272______________TGIIAGGRLLLRPIYKQIAENRNAEIFSANTLLVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLLANFPLIMGTLGLLLVGKTILVVIIGKLFGISIISAVRVGLLLAPGGEFAFVAFGEAVNQGIMTPQLSSLLFLVVGISMALTPWLAAGGQLIASRFELQDVRSLLPVESETDDLQGHIIICGFGRIGQIIAQLLSERLIPFVALDVSSDRVAIGRSLDLPVYFGDAGSREVLHKIGADRACAAAIALDTPGANYRCVWALSKYFPNVKTFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQAKLPTSEIATTINEFRSRHLSELAELCEASGSSLGYGFSR

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain