SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene944

Length: 1242 nt

Origin of reads: Biogeco_1 Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene944

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	ATP-dependent peptidase, putative n=1 Tax=Ricinus communis RepID=B9RIL2_RICCO	-	-	63%
FL-Next	sp=ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial; Arabidopsis thaliana (Mouse-ear cress).	-	-	53%
Blast2go	protein	-	-	78%

Source	GOs	Term	Type	Identity
Blast2go	response to heat	GO:0009408	Biological Process	78%
Blast2go	response to high light intensity	GO:0009644	Biological Process	78%
Blast2go	hydrolase activity	GO:0016787	Molecular Function	78%
Blast2go	mitochondrion	GO:0005739	Cellular Component	78%
Blast2go	chloroplast	GO:0009507	Cellular Component	78%

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: sp_plants

Fln subject: Q9FGM0

Fln msg: Unexpected STOP codon at 3' end. Distance to subject end: 455 aas, your sequence is shorter than subject: 385 - 806

Fln protein: MCAIQAFVLHRGGFQNSPQSLRLPPQPSGITRATTSLVYLRFQSPAPDKRLSHSTSFLKLKRLSSKPVAARASVESPNSSEGEGTGGFAARNDIDSSKGVVEQAQPGLSTNGVIEESQAQLLIEGHGTENITSEVRVEDRTDKLESGNEGLRLSVAEKKLVSEQESSGDRVEKTGDGEKLSLPLYLARFLALVWKKMTTFSFSDWLSWWPLWQREKRLEQLLAQANANPRDVSKQSALLAELNKHSPEAVIKRFEQRDHATDSRAVAEYLRALVVTNAISEYLPDERSGKPSSLPALLLELKQRASGSMDEPFSNPGMSEKHPLHVVMVDPKEANKSMRFAQELISTILFMIVFSLMWVMGAAALRKYVSSLGGIGSSPGISTA*

Protein Length: 386

Fln nts: TTACAAGAGGACTTTCGGAAGGCGCCACACGGCTCTCCTCCTCTTCGTCGACGGGCGGCC_-_ATGTGTGCCATTCAAGCATTCGTACTTCACAGGGGCGGATTCCAGAATTCTCCTCAGAGCCTCCGATTGCCGCCACAGCCTAGCGGGATAACTCGCGCAACAACATCTCTGGTATATTTAAGGTTCCAATCCCCAGCGCCTGATAAAAGGCTGAGCCATTCCACTTCTTTTTTGAAATTGAAACGCCTCTCGTCAAAACCAGTTGCTGCTAGGGCTTCGGTAGAGAGCCCCAACTCGAGTGAGGGAGAAGGAACTGGCGGTTTCGCGGCACGAAATGATATCGATAGCAGTAAAGGAGTCGTGGAGCAAGCGCAGCCGGGGTTATCTACGAACGGTGTTATTGAAGAAAGTCAAGCACAGCTGCTTATCGAGGGACATGGTACAGAAAATATCACTAGTGAAGTTAGGGTAGAAGATCGTACTGATAAACTGGAATCCGGTAATGAGGGACTGAGACTATCTGTTGCGGAAAAGAAATTAGTTTCAGAACAGGAAAGTAGCGGAGACAGAGTGGAGAAGACGGGAGATGGTGAGAAATTGAGTCTGCCGTTGTATTTGGCTAGATTTCTGGCACTGGTTTGGAAGAAGATGACTACTTTCTCCTTTTCTGATTGGCTCAGCTGGTGGCCGCTGTGGCAGCGGGAGAAGAGGTTAGAGCAACTCCTTGCGCAGGCGAACGCCAATCCGAGAGATGTTTCCAAGCAGAGCGCTCTTCTGGCAGAACTCAATAAGCACAGTCCTGAAGCTGTTATTAAGCGTTTTGAGCAAAGAGATCATGCCACAGATAGTCGGGCAGTTGCAGAATATCTTCGAGCACTCGTTGTTACAAATGCAATATCAGAGTATCTACCAGATGAACGTTCGGGCAAACCTTCCAGCCTTCCTGCACTGTTGTTAGAGTTAAAGCAGCGGGCATCTGGAAGTATGGATGAACCATTTTCAAACCCTGGCATGTCAGAGAAACATCCTCTTCACGTAGTTATGGTGGATCCTAAAGAAGCAAATAAATCGATGCGTTTTGCTCAGGAGCTTATTTCGACCATCTTATTTATGATAGTTTTTAGTTTGATGTGGGTCATGGGTGCAGCTGCACTCCGTAAGTATGTTAGCAGCTTAGGAGGAATTGGTTCATCTCCTGGTATAAGCACAGCCTAGCGGGATAACTCGCGCAACAACATCTCT

Fln Alignment:

sp_v1.1_unigene944___EVRVEDRTDKLESGNEGLRLSVAEKKLVSEQESSGDRVEKTGDG-----------EKLSLPLYLARFLALVWKKMTTFSFSDWLSWWPLWQREKRLEQLLAQANANPRDVSKQSALLAELNKHSPEAVIKRFEQRDHATDSRAVAEYLRALVVTNAISEYLPDERSGKPSSLPALLLELKQRASGSMDEPFSNPGMSEKHPLHVVMVDPKEANKSMRFAQELISTILFMIVFSLMWVMGAAALRKYV
Q9FGM0_____________EVTDSAESNRLVSDTEVSELETNDRFVGGEETKSGGEEAEVSNGVTEGKEEDQKKSKFRIVVLMMALWAAIKRAIEKVMEWEWLSWWPFSRQEKRLEKLIAEADANPKDAALQGALLAELNKHIPEAVVQRFEQREHTVDSRGVAEYIRALVITNAISEYLPDEQTGKPSSLPALLQELKHRASGNMDESFVNPGISEKQPLHVTMVNPKVSNKS-RFAQELVSTILFTVAVGLVWIMGAAALQKYI

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
1119	33			66	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain