SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene837

Length: 1821 nt

Origin of reads: Biogeco_1 Biogeco_2 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene837

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Predicted protein n=2 Tax=Physcomitrella patens RepID=E1C9U7_PHYPA	-	-	69%
FL-Next	sp=Putative septum site-determining protein minD homolog, chloroplastic; Arabidopsis thaliana (Mouse-ear cress).	-	-	86%
Blast2go	septum site-determining protein	-	-	88%

Source	GOs	Term	Type	Identity
Blast2go	chloroplast fission	GO:0010020	Biological Process	88%
Blast2go	calcium-dependent ATPase activity	GO:0030899	Molecular Function	88%
Blast2go	protein homodimerization activity	GO:0042803	Molecular Function	88%
Blast2go	chloroplast	GO:0009507	Cellular Component	88%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: sp_plants

Fln subject: Q9MBA2

Fln msg:

Fln protein: MTALAVSPTLPVQGLSGSLDEGRGRCFKSYCSPQKLRTPALTPRARRQKWTVRSILQWNRRPQLAGETPRIVVITSGKGGVGKTTTTANIGLALARLEFKVVAIDADVGLRNLDLLLGLENRVNYTAMEVLNGECRLDQALIRDKRWVNFELLCINKPRYKMPLGFGGKALVWLVDALKGRPEGSPDFVLIDCPAGIDAGFITAITPANEAILVTTPDITSLRDADRVTGLLECDGIRDIKMVVNRVRSDMIKGEDMMSVLDVQEMLGLALLGVIPEDAEVIRSTNRGYPLVLNRPPTLAGLAFEQAAWRLVEQDSMKAVLVEETPPRKKGFLQFFGG*

Protein Length: 340

Fln nts: CGTCGTGACCTTGGCTGTCACTCAATTTTTATCTTCGGAACATTATTTTCTGAATCGAAAAGTA_-_ATGACTGCACTTGCCGTTTCACCCACATTGCCTGTTCAAGGCCTCTCAGGCTCTCTTGACGAAGGCAGAGGTCGCTGCTTCAAATCCTACTGCTCACCTCAAAAACTAAGAACTCCAGCCCTAACTCCAAGAGCCAGGAGGCAAAAATGGACAGTTCGGAGCATTCTGCAGTGGAACAGAAGACCCCAGTTAGCCGGCGAAACTCCCAGAATCGTGGTAATCACATCGGGCAAGGGAGGCGTTGGCAAAACCACGACAACAGCAAACATAGGGTTAGCCCTCGCGAGGTTGGAATTTAAAGTGGTAGCCATCGATGCAGACGTCGGGCTTCGAAACCTGGACCTCCTGCTGGGCCTCGAGAACAGAGTAAACTACACAGCCATGGAAGTCTTAAATGGTGAGTGCCGCCTTGACCAGGCCTTAATTAGGGATAAAAGATGGGTTAATTTTGAGCTTCTGTGCATTAACAAACCTAGGTACAAGATGCCCTTAGGGTTTGGGGGAAAGGCACTGGTATGGCTGGTGGATGCCCTGAAAGGTAGGCCTGAAGGATCACCTGATTTTGTGCTTATAGACTGCCCTGCTGGCATTGATGCTGGTTTCATAACTGCGATTACCCCTGCCAATGAGGCCATTCTTGTAACCACCCCTGATATAACCAGTCTCCGCGATGCCGATAGGGTGACAGGTCTTTTAGAATGCGATGGCATTAGGGATATCAAGATGGTTGTGAACAGGGTCAGAAGTGATATGATAAAGGGGGAGGATATGATGTCTGTGCTTGATGTGCAAGAGATGCTGGGGCTGGCCTTATTGGGTGTGATTCCTGAGGATGCCGAGGTGATTAGGAGTACTAATAGAGGATACCCACTTGTTCTGAATAGGCCACCTACATTGGCAGGTCTCGCATTCGAACAGGCTGCTTGGAGGCTGGTGGAACAGGATAGCATGAAGGCGGTGTTGGTTGAAGAGACACCGCCTCGGAAGAAAGGGTTCTTGCAATTTTTCGGAGGTTGA___TGAGCAGGAGACCTTGGGTGGGCTCTTGGCAGATCGTTTCGAACGTTGTATGTTCTTTGGATTCTCGGATTGGCCGTATAGAACAGCAAGATTTGCAGCTACTGATTTTTTCTAAGGCCTCTATAAGGGAACATATTAAGCTGTTAGGTTGCAAATGATTAATTGATCTTTCACTTGAGACATTAAAGCTGTGCCCCCTACAAAAGTGGACAGGATATGGTTTCCATTCTTAAGTTTTGTAGAAGCAAGAACAGCCATGCTTTCTGCCTTGGGTGAATGATGTTTTGGCTCCGGAGATATTAAATTTCTTTGATAGTATATTAGGTGTTCCGTAACATTCTTGCTGTATAGATTTAAGGTGTGAGATGGTTGATACCATAGAAAATGAACTGTTCTTTTGTGCAAAATATTTGGCACGGCTTCATTATTGCTAGCTAGCAGCAGTTCAATTTTTTCGGTTATAGAGATTGCCCCTTCTGATGTATTTGCTATGTGAAAAGAAGGGTGGCATATCGATCAGCAGGTCAGGTGACTCTTCACTTTTGAACTTCTAGGAAATACACTTTCTTTGCATTTCCCTTACAGTGTTTGGTTCTTGAAACTTGTAGCGGTGTGATGTCTGTTACTAATTCTTTGGCAACATGTTTAGTCTTATATATGTGAATTCAGAGGTATTTTACATGATGTAATGAGTGATCTAGAGGGAGATAGAGGATTTAATACATGCTAGTCTTGTTTAT

Fln Alignment:

sp_v1.1_unigene837___VRSILQWNRRPQLAGETPRXXXXXXXXXXXXXXXXXANIGLALARLEFKVVAIDAXXXXXXXXXXXXXXXXXNYTAMEVLNGECRLDQALIRDKRWVNFELLCINKPRYKMPLGFGGKALVWLVDALKGRPEGSPDFVLIDCPAGIDAGFITAITPANEAILVTTPDITSLRDADRVTGLLECDGIRDIKMVVNRVRSDMIKGEDMMSVLDVQEMLGLALLGVIPEDAEVIRSTNRGYPLVLNRPPTLAGLAFEQAAWRLVEQDSMKAVLVEETPPRK
Q9MBA2_____________IRSVLQFNRKPELAGETPRIVVITSGKGGVGKTTTTANVGLSLARYGFSVVAIDADLGLRNLDLLLGLENRVNYTCVEVINGDCRLDQALVRDKRWSNFELLCISKPRSKLPMGFGGKALEWLVDALKTRPEGSPDFIIIDCPAGIDAGFITAITPANEAVLVTTPDITALRDADRVTGLLECDGIRDIKMIVNRVRTDMIKGEDMMSVLDVQEMLGLSLLGVIPEDSEVIRSTNRGFPLVLNKPPTLAGLAFEQAAWRLVEQDSMKAVMVEEEPKKR

SNPs (tot: 20)

Position	A %	C %	G %	T %	Probability
304		87		12	0.992554
307			25	75	1.0
403			57	42	1.0
544		75		25	0.996473
545	75		25		0.996473
546	75		25		0.996473
661	25			75	1.0
676	28		71		1.0
682	28	71			1.0
776	50	50			1.0
996			16	83	0.994512
1107		10		90	0.90298
1173		13		86	0.999973
1178	86			13	0.999973
1180		86		13	0.999973
1181		13		86	0.999973
1185		14	85		0.999981
1329	81		18		1.0
1619		60		40	1.0
1648		42	57		1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain