SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene813

Length: 1315 nt

Origin of reads: Biogeco_1 Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene813

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	PAP16; PAP16 (PURPLE ACID PHOSPHATASE 16); acid phosphatase/ protein serine/threonine phosphatase	-	-	59%
FL-Next	sp=Probable inactive purple acid phosphatase 16; Arabidopsis thaliana (Mouse-ear cress).	-	-	59%
Blast2go	atpap16 pap16	-	-	68%

Source	InterPros	Term	Type	e value	Identity
Blast2go	Metallophosphoesterase domain	IPR004843	-	0.0	68%
Blast2go	Phosphoesterase At2g46880	IPR011230	-	0.0	68%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: sp_plants

Fln subject: Q9SR79

Fln msg:

Fln protein: MHWAVRMGVGVGVVGFLICFLSFRLIIIPGNGTRLLPKCLSFSSANSTFRIAVFADLHYGENAWTDWGPLQDKNSDRVISTVLNMENPDFVVYLGDVITANNLAMPNASNYWEMAISPTRDKNIPWASLFGNHDDMAFEWPEEWFGSLGVPSVQCSSSQTATGSEQVSDCYFQGTTRAELIQMDVQHNLSHSSYGPKSLWPSVSNYVLEITSYKHPELPAAFLYFLDSGGGSYPEVISATQARWFQQTSAQRNPGASQAYGKIAPTPGSPIKQPCVGSINLESVAPQAAEYGIMDILTNRTSVKAVIVGHNHGLDWCCPYKSLWLCFARHTGYGGYGSWPRGARILELVEEPFAVNSWIRMEDGTTHSKITLASKV*

Protein Length: 378

Fln nts: CGTCGTGACCTTGGCTGTGGGTTTGGTTGATTGCCTTCTGGAGA_-_ATGCATTGGGCTGTCAGGATGGGTGTCGGTGTCGGTGTCGTGGGCTTCCTGATTTGTTTCCTGAGTTTTCGTCTGATAATTATTCCAGGAAACGGCACTCGATTGCTTCCCAAATGCTTGAGTTTCTCTTCTGCCAATTCCACCTTCAGGATAGCAGTGTTTGCAGACTTGCACTATGGCGAAAATGCCTGGACAGACTGGGGTCCCCTGCAAGACAAGAACTCTGATCGTGTAATCTCCACTGTACTCAACATGGAAAATCCAGATTTTGTGGTTTATCTTGGAGATGTCATTACGGCAAACAATTTGGCGATGCCGAATGCAAGCAATTATTGGGAGATGGCCATTTCACCCACTAGGGATAAGAACATACCTTGGGCTTCTTTGTTTGGTAACCATGATGATATGGCATTTGAATGGCCTGAGGAATGGTTTGGAAGCTTGGGAGTTCCTAGCGTTCAGTGCTCGAGTTCTCAAACAGCAACAGGATCTGAGCAAGTGTCTGATTGCTATTTCCAAGGGACAACCCGTGCTGAGTTAATTCAGATGGATGTGCAACACAATTTGTCTCACTCGTCATATGGGCCTAAAAGTCTCTGGCCCAGTGTCTCAAATTACGTGCTTGAAATTACCTCTTATAAGCATCCCGAGTTGCCGGCAGCCTTTCTTTACTTCTTAGATTCTGGTGGTGGGTCTTACCCTGAAGTAATTTCAGCCACTCAAGCAAGATGGTTTCAACAAACATCGGCCCAAAGGAATCCAGGTGCAAGCCAAGCGTACGGAAAAATTGCCCCTACTCCTGGCAGCCCAATAAAGCAGCCTTGTGTGGGCTCCATAAATCTAGAATCAGTTGCTCCGCAAGCAGCTGAATATGGGATTATGGATATCTTGACAAATAGAACTTCAGTGAAGGCTGTTATAGTTGGCCATAATCATGGTTTGGACTGGTGCTGCCCATACAAGAGTCTGTGGCTTTGTTTTGCTCGACATACTGGTTATGGAGGTTATGGAAGCTGGCCAAGAGGAGCCAGGATTCTGGAGCTTGTTGAAGAACCTTTTGCAGTGAATTCATGGATTAGAATGGAGGATGGGACAACCCATAGTAAGATTACATTAGCTTCCAAAGTTTAA___TTGTTCATTTACTTATTGTATTCATGTAGTGATGGATAGAATATGTCTAGGATTGCTGTTAATCAGTAGTTCTGTTAGAATCTGAGCTATGTAAGGTTGGCTTTACACGTCATTCCAATAAGAAGTAGAGTTTTATCTAC

Fln Alignment:

sp_v1.1_unigene813___STFRIAVFADLHYGENAWTDWGPLQDKNSDRVISTVLNMENPDFVVYLGDVITANNLAMPNASNYWEMAISPTRDKNIPWASLFGNHDDMAFEWPEEWFGSLGVPSVQCSSSQTATGSEQVSDCYFQGTTRAELIQMDVQHN--LSHSSYGPKSLWPSVSNYVLEITSYKHPELPAAFLYFLDSGGGSYPEVISATQARWFQQTSAQRNPG-----------ASQAYGKIAPTPGSPIKQPCVGSINLESVAPQAAEYGIMDILTNRTSVKAVIVGHNHGLDWCCPYK-SLWLCFARHTGYGGYGSWPRGARILELVEEPFAVNSWIRMEDGTTHSKITL
Q9SR79_____________SPFKIAIFADLHFGEDTWTDWGPGQDVNSVNVMSAVLDAETPDFVVYLGDVVTANNIAIQNASLFWDKAISPTRDRGIPWATLFGNHDDASFVWPLDWLSSSGIPPLRCPAASDDDG------CTFRGTTRVELIQEEIKSSNALSYSMISPKELWPSVSNYVLLVESSDHSKPPVALLYFLDSGGGSYPEVISNAQVEWFKTKSNTLNPYLRIPELIFWHIPSKAYKKVAPRLW--ITKPCVGSINKEKVVAQEAENGMMRVLENRSSVKAVFVGHNHGLDWCCPYKDKLWLCFARHTGYGGYGNWPRGSRILEISEMPFRIKTWIRMEDGSVHSEVNL

SNPs (tot: 15)

Position	A %	C %	G %	T %	Probability
543			50	50	1.0
678	12			87	0.992554
679	12	87			0.992554
680			12	87	0.992554
682	87			12	0.992554
684	87			12	0.992554
685	87			12	0.992554
686			87	12	0.992554
691	12	87			0.992554
816		66	33		0.997452
818	66			33	0.997452
819			66	33	0.997452
821		33	66		0.997452
837		75	25		0.996473
1068	33		66		0.997452

SSRs (tot: 1)

Start position	End position	Sequence	Length
66	84	GGTGTC GGTGTC GGTGTC G	19

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain