SustainPineDB

Assembly Name: SustainPine v1.1

UniGene Name: sp_v1.1_unigene788

Length: 1705 nt

Origin of reads: Biogeco_1 Uagpf Uma

UniGene Fasta

Ace file of the UniGene sp_v1.1_unigene788

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	fructokinase (EC:2.7.1.4); K00847 fructokinase [EC:2.7.1.4]	-	-	78%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	77%
Blast2go	pfkb-type carbohydrate kinase family protein	-	-	89%

Source	ECs	Term	Type	e value	Identity
AutoFact	Fructokinase.	EC:2.7.1.4	-	0.0	78%

Source	KEGGs	Term	Identity
AutoFact	Fructose and mannose metabolism	00051	78%
AutoFact	Starch and sucrose metabolism	00500	78%
AutoFact	Amino sugar and nucleotide sugar metabolism	00520	78%
AutoFact	Metabolic pathways	01100	78%

Source	GOs	Term	Type	e value	Identity
Blast2go	transferase activity	GO:0016740	Molecular Function	0.0	89%
Blast2go	chloroplast stroma	GO:0009570	Cellular Component	0.0	89%

Source	InterPros	Term	Type	Identity
Blast2go	Ribokinase	IPR002139	-	89%
Blast2go	Carbohydrate/puine kinase, PfkB, conserved site	IPR002173	-	89%
Blast2go	Carbohydrate/purine kinase	IPR011611	-	89%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: B8LNK6

Fln msg:

Fln protein: MAMRVPANSIAPFDNNVEKSAPPLTNSSTSSFVASGRLAKVNRSASLSLTIRQRRSQGSARASVADNKEQLTGESPLVVCFGEMLIDFVPTVAGLSLSEAQAFKKAAGGAPANVAVSIARLGGSSAFIGKVGDDEFGYMLADILEKNNVNNKGMRFDAGARTALAFVTLRSDGEREFMFYRNPSADMLLDESELDVDLIREAKIFHYGSISLISDPCKSAHLAAIKIAKDAGVILSYDPNLRLPLWPSEDAARAGILSIWDSADVIKLSEQEIVFLTEGEDPCDDAVVRKLFHPDLKLLLVTEGPGGCRYYTQEFNGRVEGLKVEPVDTTGAGDAFVGGILSQLSSDLSLYQDEKRLREALKFANVCGALTVTERGAIPALPSRQAVLEALVKL*

Protein Length: 396

Fln nts: GGGTCACGTGGGACCAGGCAGGATTAGGCACATCAAGTCGTCGCACACCAAAAAATCAAACAGGATAACAAACGATGACAGATCCTACCTTTTGAATAAATTTCCTTTTCGTTTCCTAAATTCTCTCGGCGCTGCTTTTCGTTCATTATATTCATCGCCATCATATTCCTGTTCTTGTCTGTCCTATCACATTATTCAGTTAGATTGTAAGCTTGCGGCC_-_ATGGCTATGCGCGTTCCGGCAAATTCCATTGCTCCATTCGACAACAATGTCGAGAAATCTGCACCCCCGCTGACGAATTCGAGCACATCGTCATTCGTCGCATCGGGCCGCCTCGCGAAGGTTAATCGATCGGCTTCGTTGTCGCTCACTATTCGGCAACGGAGGTCTCAAGGTTCTGCAAGAGCATCAGTAGCAGACAACAAAGAGCAGCTGACAGGTGAATCACCACTTGTGGTTTGCTTTGGAGAAATGCTGATTGATTTTGTCCCAACAGTTGCCGGATTGTCATTATCTGAAGCACAGGCCTTCAAAAAGGCTGCTGGAGGTGCACCTGCTAATGTTGCTGTTAGCATAGCAAGACTAGGAGGCTCATCAGCATTTATTGGAAAGGTTGGTGATGATGAGTTTGGATATATGCTTGCTGATATCTTGGAGAAAAACAATGTAAATAATAAGGGCATGCGTTTTGATGCTGGGGCTCGAACTGCTTTGGCATTTGTGACATTAAGGAGTGATGGTGAACGTGAATTTATGTTTTACAGAAATCCAAGTGCAGATATGTTACTTGACGAATCAGAGCTTGATGTGGATCTCATCAGAGAGGCAAAAATTTTCCACTATGGTTCAATAAGCCTTATTTCAGATCCTTGCAAATCAGCACATTTGGCTGCAATCAAGATAGCAAAAGATGCTGGCGTTATTCTTTCATATGATCCTAATTTGAGGCTGCCATTATGGCCATCAGAAGATGCAGCCCGGGCGGGTATTTTGAGCATTTGGGATTCTGCAGATGTTATAAAGCTAAGTGAGCAAGAGATTGTATTTTTAACTGAAGGTGAAGATCCTTGTGATGATGCTGTTGTGCGTAAACTTTTTCACCCAGATCTCAAGCTGTTGCTCGTCACAGAAGGTCCAGGTGGTTGTCGATATTACACACAGGAGTTTAACGGGAGAGTTGAGGGTCTCAAAGTGGAGCCTGTGGATACAACGGGTGCAGGAGATGCATTTGTTGGTGGAATTCTAAGCCAGCTGTCTTCTGACCTTTCTCTGTACCAGGATGAAAAGCGACTGAGAGAAGCACTTAAGTTTGCTAATGTCTGCGGTGCATTAACAGTCACAGAGAGGGGAGCAATTCCTGCTTTGCCTAGTCGACAGGCTGTGTTGGAAGCCTTGGTAAAATTGTAG___CTTGATTTTTTATTACCAAAGATTAACCATGTTCAGTAATGCGGTTGCCTGAAACTGAAAGCTTTGTAATTTTAAAGAGCTATGTAGCTCTGAGGTGATTTTGGTATCTTGGGAATTCCATTTAAACAATTTCGAATAATTATTTTGCAATTATGATTTTTTTCTCTTATGGAATGAGCTTTCGACGTTCTCTATTTCAATGTAACGTTGTTTTTTCACGCGTATTGAGGATACAAGAGAAATACATGTCTGTTCAATTTTATCATATGGAATACGTAGTTTCCTCTTTGATTTTAGTTT

Fln Alignment:

sp_v1.1_unigene788___SPLVVCFGEMLIDFVPTVAGLSLSEAQAFKKAAGGAPANVAVSIARLGGSSAFIGKVGDDEFGYMLADILEKNNVNNKGMRFDAGARTALAFVTLRSDGEREFMFYRNPSADMLLDESELDVDLIREAKIFHYGSISLISDPCKSAHLAAIKIAKDAGVILSYDPNLRLPLWPSEDAARAGILSIWDSADVIKLSEQEIVFLTEGEDPCDDAVVRKLFHPDLKLLLVTEGPGGCRYYTQEFNGRVEGLKVEPVDTTGAGDAFVGGIXXXXXXXXXXXXXEKRLREALKFANVCGALTVTERGAIPALPSRQAVLEALVKL
B8LNK6_____________SPLVVCFGEMLIDFVPTVSGVSLAKAPAFKKAPGGAPANVAVGIARLGGSSAFMGKVGDDEFGYMLADIMKENNVEHRGMRFDPVARTALAFVTLKADGEREFMFFRNPSADMLLTESELEVDLIQQAKIFHYGSISLITEPCRSAHLAAMRIAKDTGTLLSYDPNLRLPLWSSASAAREGILSIWDEADVIKVSDEEVEFLTEGADPYDDTVARNLFHPNLKLLLVTEGDQGCRYYTKDFSGRVNGVAVQAVDTTGAGDAFVSGILSELAKDLNLLQEEKGLREALKFANACGAITVTERGAIPALPTREAVLAALTKV

SNPs (tot: 5)

Position	A %	C %	G %	T %	Probability
556	85		14		0.993533
870	85		14		0.993533
1219	14			85	0.993533
1519		50		50	1.0
1608		20		80	0.999996

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain